RGD:150477569 Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Variant: RGD:150477569 -  Homo sapiens

RGD ID: 150477569
RS ID: rs199618597
ClinVar ID: CV1279473
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: SNX14  
Reference Nucleotide: G
Variant Nucleotide: A
Position
Assembly Chr Position
GRCh37 6 86,240,008
GRCh38 6 85,530,290
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Molecular Consequence Clinical Significance Trait Synonyms
NM_001350537.2:c.1676-15G>A
NM_001350533.2:c.1808-15G>A
NM_001350535.2:c.1808-15G>A
NM_001350540.2:c.1811-15G>A
More... 		05/31/2022 intron variant benign none provided

Variant Details
Variant Transcripts
Gene Symbol:SNX14
Accession:NM_001350539
Location:INTRON

Gene Symbol:SNX14
Accession:XM_047419126
Location:INTRON

Gene Symbol:SNX14
Accession:NM_001350542
Location:INTRON

Gene Symbol:SNX14
Accession:NM_001350533
Location:INTRON

Gene Symbol:SNX14
Accession:XM_017011090
Location:INTRON

Gene Symbol:SNX14
Accession:NM_001350550
Location:INTRON

Gene Symbol:SNX14
Accession:XM_047419125
Location:INTRON

Gene Symbol:SNX14
Accession:NM_001350540
Location:INTRON

Gene Symbol:SNX14
Accession:XM_047419127
Location:INTRON

Gene Symbol:SNX14
Accession:NM_001350551
Location:INTRON

Gene Symbol:SNX14
Accession:XM_047419129
Location:INTRON

Gene Symbol:SNX14
Accession:NM_001350547
Location:INTRON

Gene Symbol:SNX14
Accession:XM_047419124
Location:INTRON

Gene Symbol:SNX14
Accession:NM_001350546
Location:INTRON

Gene Symbol:SNX14
Accession:XM_047419128
Location:INTRON

Gene Symbol:SNX14
Accession:NM_020468
Location:INTRON

Gene Symbol:SNX14
Accession:XM_011535977
Location:INTRON

Gene Symbol:SNX14
Accession:NM_001350536
Location:INTRON

Gene Symbol:SNX14
Accession:NM_001350532
Location:INTRON

Gene Symbol:SNX14
Accession:NM_001350535
Location:INTRON

Gene Symbol:SNX14
Accession:XM_047419122
Location:INTRON

Gene Symbol:SNX14
Accession:NM_153816
Location:INTRON

Gene Symbol:SNX14
Accession:NM_001304479
Location:INTRON

Gene Symbol:SNX14
Accession:NM_001350537
Location:INTRON

Gene Symbol:SNX14
Accession:XM_047419121
Location:INTRON

Gene Symbol:SNX14
Accession:NM_001350543
Location:INTRON

Gene Symbol:SNX14
Accession:NM_001350552
Location:INTRON

Gene Symbol:SNX14
Accession:XM_047419120
Location:INTRON

Gene Symbol:SNX14
Accession:NM_001297614
Location:INTRON

Gene Symbol:SNX14
Accession:NM_001350544
Location:INTRON

Gene Symbol:SNX14
Accession:NM_001350553
Location:INTRON

Gene Symbol:SNX14
Accession:NM_001350534
Location:INTRON

Gene Symbol:SNX14
Accession:NM_001350545
Location:INTRON

Gene Symbol:SNX14
Accession:NM_001350541
Location:INTRON

Gene Symbol:SNX14
Accession:XM_047419123
Location:INTRON

Gene Symbol:SNX14
Accession:NM_001350549
Location:INTRON

Gene Symbol:SNX14
Accession:NM_001350548
Location:INTRON

Gene Symbol:SNX14
Accession:NM_001350538
Location:INTRON

Gene Symbol:SNX14
Accession:NR_146774
Location:INTRON;NON-CODING

Gene Symbol:SNX14
Accession:NR_146776
Location:INTRON;NON-CODING

Gene Symbol:SNX14
Accession:NR_146778
Location:INTRON;NON-CODING

Gene Symbol:SNX14
Accession:NR_146775
Location:INTRON;NON-CODING

Gene Symbol:SNX14
Accession:NR_146777
Location:INTRON;NON-CODING

Gene Symbol:SNX14
Accession:NR_146779
Location:INTRON;NON-CODING

Variant Samples
Additional References at PubMed
PMID:28492532  


Additional Information

Database Acc Id Source(s)
ClinVar RCV001714150 CLINVAR
dbSNP (RS) rs199618597 CLINVAR
MedGen C3661900 CLINVAR
NCBI Gene SNX14 CLINVAR
OMIM 616105 CLINVAR