RGD:150335707 Rat Genome Database

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Variant: RGD:150335707 -  Homo sapiens

RGD ID: 150335707
RS ID: rs16860456
ClinVar ID: CV1170835
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: ITGA6  ITGA6-AS1  
Reference Nucleotide: G
Variant Nucleotide: C
Position
Assembly Chr Position
GRCh37 2 173,330,707
GRCh38 2 172,465,979
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Molecular Consequence Clinical Significance Trait Synonyms
NC_000002.12:g.172465979G>C
NR_157573.1:n.44C>G
NM_000210.4:c.307+316G>C
NG_008853.1:g.43394G>C
More... 		06/20/2021 intron variant benign none provided

Variant Details
Variant Transcripts
Gene Symbol:ITGA6
Accession:XM_047444221
Location:5UTRS;INTRON

Gene Symbol:ITGA6
Accession:XM_047444222
Location:5UTRS;INTRON

Gene Symbol:ITGA6
Accession:XM_017004005
Location:5UTRS;INTRON

Gene Symbol:ITGA6
Accession:XM_017004006
Location:5UTRS;INTRON

Gene Symbol:ITGA6
Accession:NM_001316306
Location:5UTRS;INTRON

Gene Symbol:ITGA6-AS1
Accession:NR_157573
Location:EXON;NON-CODING

Gene Symbol:ITGA6
Accession:NM_001079818
Location:INTRON

Gene Symbol:ITGA6
Accession:NM_001365530
Location:INTRON

Gene Symbol:ITGA6
Accession:NM_001394928
Location:INTRON

Gene Symbol:ITGA6
Accession:NM_001365529
Location:INTRON

Gene Symbol:ITGA6
Accession:NM_000210
Location:INTRON

Variant Samples

Additional Information

Database Acc Id Source(s)
ClinVar RCV001540676 CLINVAR
dbSNP (RS) rs16860456 CLINVAR
MedGen C3661900 CLINVAR
NCBI Gene ITGA6 CLINVAR
  ITGA6-AS1 CLINVAR
OMIM 147556 CLINVAR