rs4724083 Rat Genome Database

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Variant: rs4724083 -  Homo sapiens

RGD ID: 14742214
RS ID: rs4724083
ClinVar ID: CV662963
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: GLI3  
Reference Nucleotide: C
Variant Nucleotide: T
Position
Assembly Chr Position
GRCh37 7 42,007,071
GRCh38 7 41,967,473
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Molecular Consequence Clinical Significance Trait Synonyms
NM_000168.6:c.2431+123G>A
NG_008434.1:g.274548G>A
NC_000007.14:g.41967473C>T
NC_000007.13:g.42007071C>T
More... 		06/14/2018 intron variant benign none provided
GWAS Catalog Data
GWAS Catalog Study Disease Trait Study Size Risk Allele Risk Allele Frequency P Value P Value MLOG SNP Passing QC Reported Odds Ratio or Beta-coefficient Ontology Accession PubMed
GCST006442 Educational attainment (years of education) up to 1,131,881 European ancestry individuals T 0.3227 4E-8 7.3979400086720375 Affymetrix, Illumina [10000000] (imputed) 0.0083 self reported educational attainment (EFO:0004784)
 PMID:30038396
GCST90095129 Vertex-wise sulcal depth 33,748 European ancestry individuals T 0.32 3E-18 17.522878745280337 Affymetrix [9061022] (imputed) 8.73 brain measurement (EFO:0004464)
 PMID:34910505

Variant Details
Variant Transcripts
Gene Symbol:GLI3
Accession:NM_000168
Location:INTRON

Gene Symbol:GLI3
Accession:XM_047420206
Location:INTRON

Gene Symbol:GLI3
Accession:XM_047420205
Location:INTRON

Gene Symbol:GLI3
Accession:XM_047420207
Location:INTRON

Gene Symbol:GLI3
Accession:XM_011515274
Location:INTRON

Gene Symbol:GLI3
Accession:XM_047420208
Location:INTRON

Gene Symbol:GLI3
Accession:XM_017011997
Location:INTRON

Gene Symbol:GLI3
Accession:XM_047420209
Location:INTRON

Variant Samples

Additional Information

Database Acc Id Source(s)
ClinVar RCV000841217 CLINVAR
dbSNP (RS) rs4724083 CLINVAR
GWAS Catalog GCST006442 GWAS Catalog
MedGen C3661900 CLINVAR
NCBI Gene GLI3 CLINVAR
OMIM 165240 CLINVAR