RGD:13513125 Rat Genome Database

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Variant: RGD:13513125 -  Homo sapiens

RGD ID: 13513125
RS ID: rs778959035
ClinVar ID: CV485387
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: SMAD4  
Reference Nucleotide: C
Variant Nucleotide: T
Position
Assembly Chr Position
GRCh37 18 48,591,786
GRCh38 18 51,065,416
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Molecular Consequence Clinical Significance Trait Synonyms
LRG_318t1:c.956-7C>T
LRG_318:g.102377C>T
NG_013013.2:g.102377C>T
NC_000018.10:g.51065416C>T
More... 		10/17/2018 intron variant likely benign Cancer predisposition; Hereditary Cancer Syndrome; Hereditary neoplastic syndrome; Neoplastic Syndromes, Hereditary; Polyposis familial of entire gastrointestinal tract; Polyposis juvenile intestinal; Tumor predisposition
Disease Annotations     Click to see Annotation Detail View


Variant Details
Variant Transcripts
Gene Symbol:SMAD4
Accession:NM_001407042
Location:INTRON

Gene Symbol:SMAD4
Accession:NM_005359
Location:INTRON

Gene Symbol:SMAD4
Accession:NM_001407041
Location:INTRON

Gene Symbol:SMAD4
Accession:NM_001407043
Location:INTRON

Gene Symbol:SMAD4
Accession:NR_176264
Location:INTRON;NON-CODING

Gene Symbol:SMAD4
Accession:NR_176265
Location:INTRON;NON-CODING

Variant Samples
Additional References at PubMed
PMID:25741868   PMID:28492532  


Additional Information

Database Acc Id Source(s)
ClinVar RCV000584567 CLINVAR
  RCV000663316 CLINVAR
  RCV001495387 CLINVAR
dbSNP (RS) rs778959035 CLINVAR
MedGen C0027672 CLINVAR
  C0345893 CLINVAR
  C1868081 CLINVAR
NCBI Gene SMAD4 CLINVAR
OMIM 174900 CLINVAR
  600993 CLINVAR
SNOMED CT 699346009 CLINVAR
  9273005 CLINVAR