RGD:11664235 Rat Genome Database

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Variant: RGD:11664235 -  Homo sapiens

RGD ID: 11664235
RS ID: rs886059718
ClinVar ID: CV299881
Genic Status: GENIC
Type: insertion (SO:0000667) 
Associated Genes: LOC124900602  SNCA  
Reference Nucleotide: -
Variant Nucleotide: AAA
Position
Assembly Chr Position
GRCh37 4 90,646,468
GRCh38 4 89,725,317
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Molecular Consequence Clinical Significance Trait Synonyms
NG_011851.1:g.117979_117980insTTT
NC_000004.12:g.89725317_89725318insAAA
NC_000004.11:g.90646468_90646469insAAA
NM_000345.4:c.*1310_*1311insTTT
More... 		06/14/2016 3 prime utr variant uncertain significance
Disease Annotations     Click to see Annotation Detail View


Variant Details
Variant Transcripts
Gene Symbol:SNCA
Accession:NM_001146054
Location:3UTRS;EXON

Gene Symbol:SNCA
Accession:NM_001146055
Location:3UTRS;EXON

Gene Symbol:SNCA
Accession:NM_001375286
Location:3UTRS;EXON

Gene Symbol:SNCA
Accession:NM_001375287
Location:3UTRS;EXON

Gene Symbol:SNCA
Accession:NM_001375288
Location:3UTRS;EXON

Gene Symbol:SNCA
Accession:NM_000345
Location:3UTRS;EXON

Gene Symbol:SNCA
Accession:NM_001375285
Location:3UTRS;EXON

Gene Symbol:SNCA
Accession:NM_001375290
Location:3UTRS;EXON

Gene Symbol:SNCA
Accession:NM_007308
Location:3UTRS;EXON

Gene Symbol:SNCA
Accession:NR_164676
Location:EXON;NON-CODING

Gene Symbol:LOC124900602
Accession:XR_007058466
Location:EXON;NON-CODING

Gene Symbol:SNCA
Accession:XM_011532203
Location:INTRON

Gene Symbol:SNCA
Accession:XM_011532205
Location:INTRON

Gene Symbol:SNCA
Accession:XM_047416097
Location:INTRON

Gene Symbol:SNCA
Accession:XM_011532207
Location:INTRON

Gene Symbol:SNCA
Accession:XM_011532206
Location:INTRON

Gene Symbol:SNCA
Accession:XM_011532204
Location:INTRON

Gene Symbol:LOC124900602
Accession:XR_007058465
Location:INTRON;NON-CODING

Gene Symbol:LOC105377329
Accession:XR_001741764
Location:INTRON;NON-CODING

Gene Symbol:SNCA
Accession:NR_164675
Location:INTRON;NON-CODING

Gene Symbol:SNCA
Accession:NR_164674
Location:INTRON;NON-CODING

Gene Symbol:LOC105377329
Accession:XR_938983
Location:INTRON;NON-CODING

Variant Samples

Additional Information

Database Acc Id Source(s)
ClinVar RCV000403671 CLINVAR
dbSNP (RS) rs886059718 CLINVAR
MedGen CN239359 CLINVAR
NCBI Gene SNCA CLINVAR
OMIM 163890 CLINVAR