RGD:11658960 Rat Genome Database

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Variant: RGD:11658960 -  Homo sapiens

RGD ID: 11658960
RS ID: rs886051873
ClinVar ID: CV334507
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: CLN3  LOC127883553  
Reference Nucleotide: C
Variant Nucleotide: A
Position
Assembly Chr Position
GRCh37 16 28,503,327
GRCh38 16 28,492,006
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Molecular Consequence Clinical Significance Trait Synonyms
NM_001286109.2:c.-330G>T
NM_001286104.2:c.-77+14G>T
LRG_689t1:c.-247G>T
LRG_689t2:c.-77+14G>T
More... 		06/14/2016 5 prime utr variant uncertain significance CLN3 Disease; CLN3-Related Neuronal Ceroid-Lipofuscinosis; Spielmeyer Sjogren disease
Disease Annotations     Click to see Annotation Detail View


Variant Details
Variant Transcripts
Gene Symbol:CLN3
Accession:NM_001286105
Location:5UTRS;EXON

Gene Symbol:CLN3
Accession:NM_000086
Location:5UTRS;EXON

Gene Symbol:CLN3
Accession:NM_001286109
Location:5UTRS;EXON

Gene Symbol:CLN3
Accession:NM_001286110
Location:5UTRS;EXON

Gene Symbol:CLN3
Accession:NM_001042432
Location:5UTRS;INTRON

Gene Symbol:CLN3
Accession:NM_001286104
Location:5UTRS;INTRON

Variant Samples

Additional Information

Database Acc Id Source(s)
ClinVar RCV000353206 CLINVAR
  RCV001116117 CLINVAR
dbSNP (RS) rs886051873 CLINVAR
MedGen C0751383 CLINVAR
  CN239251 CLINVAR
NCBI Gene CLN3 CLINVAR
OMIM 204200 CLINVAR
  607042 CLINVAR