RGD:11651240 Rat Genome Database

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Variant: RGD:11651240 -  Homo sapiens

RGD ID: 11651240
RS ID: rs886058164
ClinVar ID: CV290223
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: PDCD10  
Reference Nucleotide: G
Variant Nucleotide: A
Position
Assembly Chr Position
GRCh37 3 167,452,628
GRCh38 3 167,734,840
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Molecular Consequence Clinical Significance Age of Onset Prevalence Trait Synonyms
NG_008158.1:g.5024C>T
NC_000003.12:g.167734840G>A
NC_000003.11:g.167452628G>A
NM_007217.4:c.-432C>T
More... 		06/14/2016 2kb upstream variant|5 prime utr variant uncertain significance all ages 1-5 / 10 000 Cerebral cavernous malformations 3
Disease Annotations     Click to see Annotation Detail View


Variant Details
Variant Transcripts
Gene Symbol:PDCD10
Accession:XM_005247086
Location:5UTRS;EXON

Gene Symbol:PDCD10
Accession:XM_017005644
Location:5UTRS;EXON

Gene Symbol:PDCD10
Accession:NM_007217
Location:5UTRS;EXON

Gene Symbol:PDCD10
Accession:XM_047447375
Location:5UTRS;EXON

Gene Symbol:PDCD10
Accession:XM_047447374
Location:5UTRS;EXON

Gene Symbol:PDCD10
Accession:XM_005247087
Location:5UTRS;EXON

Gene Symbol:PDCD10
Accession:XM_011512368
Location:5UTRS;EXON

Gene Symbol:PDCD10
Accession:XM_005247088
Location:5UTRS;EXON

Gene Symbol:PDCD10
Accession:XM_011512369
Location:5UTRS;EXON

Gene Symbol:PDCD10
Accession:NM_145859
Location:5UTRS;EXON

Gene Symbol:PDCD10
Accession:NM_145860
Location:5UTRS;EXON

Gene Symbol:PDCD10
Accession:XM_006713485
Location:5UTRS;EXON

Variant Samples

Additional Information

Database Acc Id Source(s)
ClinVar RCV000297970 CLINVAR
dbSNP (RS) rs886058164 CLINVAR
MedGen C1864040 CLINVAR
NCBI Gene LOC129937857 CLINVAR
  PDCD10 CLINVAR
OMIM 603285 CLINVAR
  609118 CLINVAR