RGD:11621263 Rat Genome Database

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Variant: RGD:11621263 -  Homo sapiens

RGD ID: 11621263
RS ID: rs17520676
ClinVar ID: CV324744
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: LOC105369736  LRRK2  
Reference Nucleotide: A
Variant Nucleotide: G
Position
Assembly Chr Position
GRCh37 12 40,761,913
GRCh38 12 40,368,111
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Molecular Consequence Clinical Significance Age of Onset Trait Synonyms
NG_011709.1:g.148101A>G
NC_000012.12:g.40368111A>G
NC_000012.11:g.40761913A>G
NM_198578.4:c.*346A>G
More...
01/13/2018 3 prime utr variant benign|likely benign adult LRRK2-Related Parkinson Disease; Parkinson disease 8, susceptibility to
Disease Annotations     Click to see Annotation Detail View


Variant Details
Variant Transcripts
Gene Symbol:LRRK2
Accession:NM_198578
Location:3UTRS;EXON

Gene Symbol:LRRK2
Accession:XM_005268629
Location:3UTRS;EXON

Gene Symbol:LRRK2
Accession:XM_011537877
Location:3UTRS;EXON

Gene Symbol:LRRK2
Accession:XM_017018787
Location:3UTRS;EXON

Gene Symbol:LRRK2
Accession:XM_024448833
Location:3UTRS;EXON

Gene Symbol:LRRK2
Accession:XM_047428277
Location:3UTRS;EXON

Gene Symbol:LRRK2
Accession:XR_007063041
Location:EXON;NON-CODING

Gene Symbol:LRRK2
Accession:XM_011537881
Location:INTRON

Gene Symbol:LRRK2
Accession:XM_011537882
Location:INTRON

Gene Symbol:LRRK2
Accession:XM_017018786
Location:INTRON

Gene Symbol:LRRK2
Accession:XM_047428278
Location:INTRON

Gene Symbol:LRRK2
Accession:XM_047428279
Location:INTRON

Gene Symbol:LOC105369736
Accession:XR_944868
Location:INTRON;NON-CODING

Gene Symbol:LOC105369736
Accession:XR_944869
Location:INTRON;NON-CODING

Gene Symbol:LOC105369736
Accession:XR_944867
Location:INTRON;NON-CODING

Gene Symbol:LOC105369736
Accession:XR_944866
Location:INTRON;NON-CODING

Gene Symbol:LOC105369736
Accession:XR_007063562
Location:INTRON;NON-CODING

Variant Samples

Additional Information

Database Acc Id Source(s)
ClinVar RCV000346560 CLINVAR
dbSNP (RS) rs17520676 CLINVAR
MedGen C1846862 CLINVAR
NCBI Gene LRRK2 CLINVAR
OMIM 607060 CLINVAR
  609007 CLINVAR