RGD:11606435 Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Variant: RGD:11606435 -  Homo sapiens

RGD ID: 11606435
ClinVar ID: CV312539
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: B4GALT1  
Reference Nucleotide: A
Variant Nucleotide: C
Position
Assembly Chr Position
GRCh37 9 33,110,693
GRCh38 9 33,110,695
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Molecular Consequence Clinical Significance Trait Synonyms
NM_001497.3:c.*2759T>G
NG_008919.1:g.61664T>G
NC_000009.12:g.33110695A>C
NC_000009.11:g.33110693A>C
 06/14/2016 3 prime utr variant uncertain significance Carbohydrate-deficient glycoprotein syndrome

Variant Details
Variant Transcripts
Gene Symbol:B4GALT1
Accession:NM_001378496
Location:3UTRS;EXON

Gene Symbol:B4GALT1
Accession:XM_047423232
Location:3UTRS;EXON

Gene Symbol:B4GALT1
Accession:XM_047423231
Location:3UTRS;EXON

Gene Symbol:B4GALT1
Accession:NM_001497
Location:3UTRS;EXON

Gene Symbol:B4GALT1
Accession:NM_001378495
Location:3UTRS;EXON

Gene Symbol:B4GALT1
Accession:NM_001378497
Location:INTRON

Variant Samples