RGD:11051209 Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources

Variant: RGD:11051209 -  Homo sapiens

RGD ID: 11051209
RS ID: rs869312528
ClinVar ID: CV225328
Genic Status: GENIC
Type: SNV (SO:0001483) 
Associated Genes: BRCC3  
Reference Nucleotide: A
Variant Nucleotide: G
Position
Assembly Chr Position
GRCh37 X 154,307,219
GRCh38 X 155,078,944
JBrowse: View Region in Genome Browser (JBrowse)
Model



ClinVar Data
HGVS Name(s) Last Evaluated Molecular Consequence Clinical Significance Trait Synonyms
NC_000023.11:g.155078944A>G
NC_000023.10:g.154307219A>G
NG_047184.1:g.12525A>G
NM_024332.4:c.403+241A>G
More... 		12/01/2015 intron variant likely benign Cancer predisposition; Hereditary Cancer Syndrome; Hereditary neoplastic syndrome; Neoplastic Syndromes, Hereditary; Tumor predisposition
Disease Annotations     Click to see Annotation Detail View


Variant Details
Variant Transcripts
Gene Symbol:BRCC3
Accession:NM_001242640
Location:INTRON

Gene Symbol:BRCC3
Accession:NM_024332
Location:INTRON

Gene Symbol:BRCC3
Accession:NM_001018055
Location:INTRON

Gene Symbol:BRCC3
Accession:XM_005274751
Location:INTRON

Variant Samples

Additional Information

Database Acc Id Source(s)
ClinVar RCV000209556 CLINVAR
dbSNP (RS) rs869312528 CLINVAR
MedGen C0027672 CLINVAR
NCBI Gene BRCC3 CLINVAR
OMIM 300617 CLINVAR
SNOMED CT 699346009 CLINVAR