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Strain Registration

Strain: SS.LEW-(D1Mco55-D1Wox6)/Bj

Symbol: SS.LEW-(D1Mco55-D1Wox6)/Bj
Strain: SS.LEW-(D1Mco55-D1Wox6)
Substrain: Bj
RGD ID: 9685795
Citation ID: RRID:RGD_9685795
Ontology ID: RS:0003863
Also Known As: SS.LEW-(D1Mco55-D1Wox6)/Bj; S.LEW(Ch1X3X3X3BX13)
Type: congenic
Available Source: Not Available
Origination: Medical College of Ohio, Toledo, Ohio, USA
Description: This is a congenic substrain developed by crossing the progenitor strain SS.LEW-(D1Mco36-D1Mco101)/Mco to SS/Jr to get F2 which were again crossed with SS/Jr to duplicate the recombinant region
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21126,540,680 - 126,540,917RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01134,089,429 - 137,787,460RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01135,124,726 - 138,778,112RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41127,933,558 - 131,956,825RGD_MAPPER_PIPELINERGSC3.4





Phenotype Annotations     Click to see Annotation Detail View

Phenotype Values via PhenoMiner     Click to see Annotation Detail View
Options:  View chart  |  Download data table  |  View expanded data table


References

References - curated
# Reference Title Reference Citation
1. Multiple blood pressure loci with opposing blood pressure effects on rat chromosome 1 in a homologous region linked to hypertension on human chromosome 15. Mell B, etal., Hypertens Res. 2015 Jan;38(1):61-7. doi: 10.1038/hr.2014.134. Epub 2014 Sep 18.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D1Mco55)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21126,540,680 - 126,540,917 (+)MAPPER
Rnor_6.01134,089,429 - 134,089,665NCBI
Rnor_5.01135,124,726 - 135,124,962UniSTS
RGSC_v3.41127,933,558 - 127,933,794UniSTS
Celera1118,675,370 - 118,675,606UniSTS
Cytogenetic Map1 RGD

Flank 2 / 1 (D1Wox6)
Rat AssemblyChrPosition (strand)Source
Rnor_6.01137,787,261 - 137,787,460NCBI
Rnor_5.01138,777,913 - 138,778,112UniSTS
RGSC_v3.41131,956,599 - 131,956,825RGD
RGSC_v3.41131,956,600 - 131,956,825UniSTS
Celera1122,135,860 - 122,136,051UniSTS
RH 3.4 Map11041.2RGD
RH 3.4 Map11041.2UniSTS
Strain QTL Data
Symbol Name Trait
Bp376 Blood pressure QTL 376 arterial blood pressure trait   (VT:2000000)    

Additional Information