Strain Report - Rat Genome Database

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Strain: LOU.BN-(rs13448399-D5Rat133)/Bbb

Symbol: LOU.BN-(rs13448399-D5Rat133)/Bbb
Strain: LOU.BN-(rs13448399-D5Rat133)
Substrain: Bbb
RGD ID: 8662955
Citation ID: RRID:RGD_8662955
Ontology ID: RS:0003794
Also Known As: LOU.BN-(rs13448399-D5Rat133)/Bbb; LOU.BN(chr5)E
Type: congenic
Available Source: Not Available
Origination: Max-Delbruck-Center for Molecular Medicine, Berlin, Germany
Description: this congenic strain is produced by backcrossing LOU.BN-(D5Rat59-D5Rat133)/Bbb to LOU/MBbb
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.256,020,990 - 47,798,053RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.055,649,731 - 48,652,920RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0553,233,142 - 53,233,338RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4549,696,057 - 49,696,253RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
# Reference Title Reference Citation
1. Protease inhibitor 15, a candidate gene for abdominal aortic internal elastic lamina ruptures in the rat. Falak S, etal., Physiol Genomics. 2014 Jun 15;46(12):418-28. doi: 10.1152/physiolgenomics.00004.2014. Epub 2014 May 1.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (rs13448399)
Rat AssemblyChrPosition (strand)Source
mRatBN7.256,020,990 - 6,020,990RGD
Rnor_6.055,649,731 - 5,649,731RGD
Celera55,603,888 - 5,603,888RGD

Flank 2 / 1 (D5Rat133)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2547,797,856 - 47,798,053 (+)MAPPER
Rnor_6.0548,652,724 - 48,652,920NCBI
Rnor_5.0553,233,142 - 53,233,338UniSTS
RGSC_v3.4549,696,057 - 49,696,253UniSTS
Celera546,555,923 - 46,556,119UniSTS
SHRSP x BN Map531.7499UniSTS
SHRSP x BN Map531.7499RGD
Cytogenetic Map5q21UniSTS

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_characteristics introgressed region is homozygous LOU segment that spans 0-5.2 Mb, had negligible number of ruptures of the internal elastic lamina (RIEL) even though had BN allele to 45 Mb 8662864