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Strain Registration

Strain: LOU.BN-(D5Rat59-rs13448399)/Bbb

Symbol: LOU.BN-(D5Rat59-rs13448399)/Bbb
Strain: LOU.BN-(D5Rat59-rs13448399)
Substrain: Bbb
RGD ID: 8662925
Citation ID: RRID:RGD_8662925
Ontology ID: RS:0003792
Also Known As: LOU.BN(chr5)C; LOU.BN-(D5Rat59-rs13448399)/Bbb
Type: congenic
Available Source: Not Available
Origination: Max-Delbruck-Center for Molecular Medicine, Berlin, Germany
Description: this congenic strain is produced by backcrossing LOU.BN-(D5Rat59-D5Rat133)/Bbb to LOU/MBbb
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.252,282,226 - 2,282,446RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.051,666,587 - 1,666,805RGD_MAPPER_PIPELINERnor6.0
Rnor_5.051,662,934 - 1,663,152RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.451,368,223 - 1,368,442RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
# Reference Title Reference Citation
1. Protease inhibitor 15, a candidate gene for abdominal aortic internal elastic lamina ruptures in the rat. Falak S, etal., Physiol Genomics. 2014 Jun 15;46(12):418-28. doi: 10.1152/physiolgenomics.00004.2014. Epub 2014 May 1.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D5Rat59)
Rat AssemblyChrPosition (strand)Source
mRatBN7.252,282,226 - 2,282,446 (+)MAPPER
Rnor_6.051,666,587 - 1,666,805NCBI
Rnor_5.051,662,934 - 1,663,152UniSTS
RGSC_v3.451,368,224 - 1,368,442UniSTS
RGSC_v3.451,368,223 - 1,368,442RGD
RGSC_v3.151,368,224 - 1,368,442RGD
Celera51,917,196 - 1,917,414UniSTS
RH 3.4 Map50.0RGD
RH 3.4 Map50.0UniSTS
RH 2.0 Map50.0RGD
SHRSP x BN Map50.0RGD

Flank 2 / 1 (rs13448399)
Rat AssemblyChrPosition (strand)Source
Celera55,603,888 - 5,603,888RGD

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_characteristics introgressed region spans 0-5.2 Mb, had significantly high number of ruptures of the internal elastic lamina (RIEL) in abdominal aorta and common iliac arteries 8662864