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Strain Registration

Strain: SHRSP.SHR-(D1Mit30-D1Rat269)/Izm

Symbol: SHRSP.SHR-(D1Mit30-D1Rat269)/Izm
Strain: SHRSP.SHR-(D1Mit30-D1Rat269)
Substrain: Izm
RGD ID: 7411709
Citation ID: RRID:RGD_7411709
Ontology ID: RS:0003574
Also Known As: SHRSP.SHR-(D1Mgh5-D1Got87)/Izm; SPrch1.5; NBRP Rat No: 0711; SHRSP.SHR-(D1Mit30-D1Rat269)/Izm
Type: congenic
Available Source: National BioResource Project for the Rat in Japan
Origination: Department of Functional Pathology, Shimane University Faculty of Medicine, Izumo, Japan
Description: male SHRSP.SHR-(D1Rat93-D1Rat269)/Izm were crossed with female SHRSP/Izm and the offsprings were intercrossed, animals were genotyped to get the desired recombinants which were then backcrossed to SHRSP/Izm
Coat Color: Albino
Inbred Generations: F11
Last Known Status: Cryopreserved Sperm
Research Usage Cardio-Hypertension
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2194,494,440 - 124,977,364RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0199,983,293 - 132,448,306RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01101,048,742 - 133,485,967RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4194,473,940 - 126,292,805RGD_MAPPER_PIPELINERGSC3.4





Disease Annotations     Click to see Annotation Detail View
Hypotension  (IAGP)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

References

References - curated
# Reference Title Reference Citation
1. Two genomic regions of chromosomes 1 and 18 explain most of the stroke susceptibility under salt loading in stroke-prone spontaneously hypertensive rat/Izm. Gandolgor TA, etal., Hypertension. 2013 Jul;62(1):55-61. doi: 10.1161/HYPERTENSIONAHA.111.00488. Epub 2013 May 20.
2. Strains registered by the National Bio Resource Project for the Rat in Japan Personal Communication with NBRP
3. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D1Mit30)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2194,494,440 - 94,494,763 (+)MAPPER
mRatBN7.2194,494,579 - 94,494,763 (+)MAPPER
Rnor_6.0199,983,524 - 99,983,705NCBI
Rnor_6.0199,983,293 - 99,983,705NCBI
Rnor_5.01101,048,742 - 101,049,154UniSTS
Rnor_5.01101,048,973 - 101,049,154UniSTS
RGSC_v3.4194,473,941 - 94,474,122UniSTS
RGSC_v3.4194,473,940 - 94,474,122RGD
RGSC_v3.1194,552,051 - 94,552,233RGD
Celera188,761,687 - 88,761,868UniSTS
RH 3.4 Map1904.9UniSTS
RH 3.4 Map1904.9RGD
RH 2.0 Map1595.2RGD
Cytogenetic Map1q22UniSTS

Flank 2 / 1 (D1Rat269)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21124,977,174 - 124,977,364 (+)MAPPER
Rnor_6.01132,448,117 - 132,448,306NCBI
Rnor_5.01133,485,778 - 133,485,967UniSTS
RGSC_v3.41126,292,616 - 126,292,805UniSTS
RGSC_v3.41126,292,615 - 126,292,805RGD
RGSC_v3.11126,370,959 - 126,371,148RGD
Celera1117,133,184 - 117,133,371UniSTS
RH 3.4 Map1979.2RGD
RH 3.4 Map1979.2UniSTS
RH 2.0 Map1663.9RGD
SHRSP x BN Map160.8499RGD

Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2015-05-28 SHRSP.SHR-(D1Mit30-D1Rat269)/Izm    SHRSP.SHR-(D1Mit30-D1Rat269)/Izm    Name updated 68913 APPROVED
2015-05-28 SHRSP.SHR-(D1Mit30-D1Rat269)/Izm    SHRSP.SHR-(D1Mit30-D1Rat269)/Izm    Name updated 68913 APPROVED