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Strain Registration

Strain: DA.F344-(D10Rat195-D10Arb27)/Nsi

Symbol: DA.F344-(D10Rat195-D10Arb27)/Nsi
Strain: DA.F344-(D10Rat195-D10Arb27)
Substrain: Nsi
RGD ID: 7364976
Citation ID: RRID:RRRC_00677
Ontology ID: RS:0003546
Also Known As: DA.F344(Cia5d3s); DA.F344-(D10Rat195-D10Arb27)/Nsi
Type: congenic
Available Source: Rat Resource and Research Center
Origination: North Shore-Long Island Jewish Research Institute,350 Community Drive - Manhasset, NY 11030.
Description: Congenic strain created by backcrossing F344 into DA/BklArbNsi 8 times then brother-sister mating to maintain in the homozygous state
Coat Color: agouti
Last Known Status: Cryopreserved Sperm (as of 2019-02-19)
Research Usage arthritis/autoimmunity studies
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21062,541,890 - 65,927,370RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01065,234,285 - 68,305,173RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01066,394,066 - 67,971,488RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41063,690,620 - 69,160,517RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
# Reference Title Reference Citation
1. Data registered by the Rat Resource & Research Center Personal Communication with Rat Resource & Research Center
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D10Rat195)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21062,541,890 - 62,542,101 (-)MAPPER
Rnor_6.01065,234,285 - 65,234,495NCBI
Rnor_5.01066,394,066 - 66,394,276UniSTS
RGSC_v3.41063,690,620 - 63,690,831RGD
RGSC_v3.41063,690,621 - 63,690,831UniSTS
RGSC_v3.11063,704,243 - 63,704,454RGD
Celera1061,522,577 - 61,522,787UniSTS
FHH x ACI Map1052.73RGD
FHH x ACI Map1052.73UniSTS

Flank 2 / 1 (D10Arb27)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21065,927,233 - 65,927,370 (+)MAPPER
Rnor_6.01068,305,037 - 68,305,173NCBI
Rnor_5.01067,971,352 - 67,971,488UniSTS
RGSC_v3.41069,160,380 - 69,160,517RGD
RGSC_v3.41069,160,381 - 69,160,517UniSTS
RGSC_v3.11069,174,003 - 69,174,140RGD
Celera1064,883,710 - 64,883,846UniSTS
SHRSP x BN Map1047.6099UniSTS
SHRSP x BN Map1047.6099RGD
FHH x ACI Map1053.73RGD
Cytogenetic Map10q26UniSTS

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_other F344 alleles between: D10Rat195 and D10Arb27. DA alleles at: D10Wox13 and D10Nsi90. 2292495
Database Acc Id Source(s)
RRRC RRRC:00677 RGD