Strain Report - Rat Genome Database

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Strain: SS.BN-(rs64114288-rs107464428)/Aek

Symbol: SS.BN-(rs64114288-rs107464428)/Aek
Strain: SS.BN-(rs64114288-rs107464428)
Substrain: Aek
RGD ID: 7364919
Citation ID: RRID:RRRC_00686
Ontology ID: RS:0003531
Also Known As: SS.BN-(rs64114288-rs107464428)/Aek; SS-2BNf
Type: congenic
Available Source: Rat Resource and Research Center
Origination: Rat Resource and Research Center
Description: This congenic strain contains a fragment of chromosome 2 of the SS-Chr 2BN/Mcwi from the top to ~227 Mb transferred to the SS/JrHsdMcwi strain background.
Last Known Status: Cryopreserved Sperm (as of 2019-02-19)
Research Usage cardiac ischemia
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
Rnor_6.024,124,871 - 233,798,506RGD_MAPPER_PIPELINERnor6.0
Rnor_5.024,122,074 - 253,120,782RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.424,393,495 - 226,787,712RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
# Reference Title Reference Citation
1. Data registered by the Rat Resource & Research Center Personal Communication with Rat Resource & Research Center
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (rs64114288)
Rat AssemblyChrPosition (strand)Source
Rnor_6.024,124,871 - 4,124,871RGD
Rnor_5.024,122,074 - 4,122,074RGD
RGSC_v3.424,393,495 - 4,393,495RGD
Celera23,254,703 - 3,254,703RGD

Flank 2 / 1 (rs107464428)
Rat AssemblyChrPosition (strand)Source
Rnor_6.02233,798,506 - 233,798,506RGD
Rnor_5.02253,120,782 - 253,120,782RGD
RGSC_v3.42226,787,712 - 226,787,712RGD
Celera2210,199,323 - 210,199,323RGD

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_reproduction This strain is very good breeders producing large litters. Good dams. Some mastitis issues at wean with the largest litters. 2292495

Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-10-11 SS.BN-(rs64114288-rs107464428)/Aek    SS.BN-(rs64114288-rs107464428)/Aek    Name updated 68913 APPROVED
2013-10-11 SS.BN-(rs64114288-rs107464428)/Aek    SS.BN-(rs64114288-rs107464428)/Aek    Name updated 68913 APPROVED

Database Acc Id Source(s)
RRRC RRRC:00686 RGD