Strain Report - Rat Genome Database

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Strain: WF.COP-(D2Rat253-D2Uwm17)/Uwm

Symbol: WF.COP-(D2Rat253-D2Uwm17)/Uwm
Strain: WF.COP-(D2Rat253-D2Uwm17)
Substrain: Uwm
RGD ID: 728391
RRID: RGD_728391
Ontology ID: RS:0000997
Also known as: WF.COP-(D2Rat253-D2Uwm17)/Uwm; WF.COP-D2Rat253/D2Uwm17; line K
Type: congenic
Source: University of Wisconsin, Madison, Wisconsin, USA
Origin: A segment of chromosome 2 was transferred from COP into the WF background. The recombinant congenic strain, line K, was derived from three Mcs1-congenic lines at various backcross generations and was produced at the N10 or N12 backcross generations by intercrossing heterozygous brother and sister pairs.
Inbred Generations: F10
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2226,559,817 - 32,374,088RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0225,012,974 - 31,224,929RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0244,171,519 - 50,382,003RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4225,663,274 - 32,051,637RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
1. Haag JD, etal., Cancer Res 2003 Sep 15;63(18):5808-12.
2. RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D2Rat253)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2226,559,817 - 26,560,006 (+)MAPPER
Rnor_6.0225,012,974 - 25,013,162NCBI
Rnor_5.0244,171,519 - 44,171,707UniSTS
RGSC_v3.4225,663,274 - 25,663,463RGD
RGSC_v3.4225,663,275 - 25,663,463UniSTS
RGSC_v3.1225,583,643 - 25,583,832RGD
Celera222,625,641 - 22,625,829UniSTS
FHH x ACI Map212.2699RGD
FHH x ACI Map212.2699UniSTS

Flank 2 / 1 (D2Uwm17)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2232,373,770 - 32,374,088 (+)MAPPER
Rnor_6.0231,224,612 - 31,224,929NCBI
Rnor_5.0250,381,686 - 50,382,003UniSTS
RGSC_v3.4232,051,319 - 32,051,634RGD
RGSC_v3.4232,051,320 - 32,051,637UniSTS
RGSC_v3.1231,971,688 - 31,972,003RGD
Celera228,374,451 - 28,374,776UniSTS
Cytogenetic Map2 RGD
Strain QTL Data
Symbol Name Trait
Mamtr3 Mammary tumor resistance QTL 3 mammary gland integrity trait   (VT:0010552)    

Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-10-05 WF.COP-(D2Rat253-D2Uwm17)/Uwm    WF.COP-(D2Rat253-D2Uwm17/Uwm    Name updated 68913 APPROVED
2012-10-05 WF.COP-(D2Rat253-D2Uwm17)/Uwm    WF.COP-(D2Rat253-D2Uwm17/Uwm    Symbol updated 68687 APPROVED
2012-10-05 WF.COP-(D2Rat253-D2Uwm17)/Uwm    WF.COP-(D2Rat253-D2Uwm17/Uwm    Name updated 68913 APPROVED
2012-10-05 WF.COP-(D2Rat253-D2Uwm17)/Uwm    WF.COP-(D2Rat253-D2Uwm17/Uwm    Symbol updated 68687 APPROVED
2011-02-24 WF.COP-(D2Rat253-D2Uwm17/Uwm    WF.COP-(D2Rat253-D2Uwm17/Uwm    Name updated 68913 APPROVED