Strain Report - Rat Genome Database

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Strain: WF.COP-(D2Mit29-D2Uwm13)/Uwm

Symbol: WF.COP-(D2Mit29-D2Uwm13)/Uwm
Strain: WF.COP-(D2Mit29-D2Uwm13)
Substrain: Uwm
RGD ID: 728387
RRID: RGD_728387
Ontology ID: RS:0000995
Also known as: WF.COP-(D2Mit29-D2Uwm13)/Uwm; WF.COP-D2Mit29/D1Uwm13; line Q
Type: congenic
Source: University of Wisconsin, Madison, Wisconsin, USA
Origin: A segment of chromosome 2 was transferred from COP into the WF background. The recombinant congenic strain (line Q) was derived from three Mcs1-congenic lines at various backcross generations and was produced at the N10 or N12 backcross generations by intercrossing heterozygous brother and sister pairs.
Inbred Generations: F10
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.227,887,772 - 13,840,758RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.025,417,336 - 11,522,696RGD_MAPPER_PIPELINERnor6.0
Rnor_5.025,396,621 - 11,387,756RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.425,601,528 - 11,957,973RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
1. Haag JD, etal., Cancer Res 2003 Sep 15;63(18):5808-12.
2. RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D2Mit29)
Rat AssemblyChrPosition (strand)Source
mRatBN7.227,887,772 - 7,888,014 (+)MAPPER
Rnor_6.025,417,336 - 5,417,577NCBI
Rnor_5.025,396,621 - 5,396,862UniSTS
RGSC_v3.425,601,528 - 5,601,770RGD
RGSC_v3.425,601,529 - 5,601,770UniSTS
RGSC_v3.125,627,976 - 5,628,373RGD
Celera24,338,310 - 4,338,555UniSTS
Cytogenetic Map2q11UniSTS

Flank 2 / 1 (D2Uwm13)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2213,840,542 - 13,840,758 (+)MAPPER
Rnor_6.0211,522,478 - 11,522,696NCBI
Rnor_5.0211,387,538 - 11,387,756UniSTS
RGSC_v3.4211,957,754 - 11,957,973RGD
RGSC_v3.4211,957,755 - 11,957,973UniSTS
RGSC_v3.1211,876,508 - 11,876,727RGD
Celera210,155,706 - 10,155,924UniSTS
Cytogenetic Map2 RGD
Strain QTL Data
Symbol Name Trait
Mamtr2 Mammary tumor resistance QTL 2 mammary gland integrity trait   (VT:0010552)    

Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-10-05 WF.COP-(D2Mit29-D2Uwm13)/Uwm    WF.COP-(D2Mit29-D2Uwm13)/Uwm    Name updated 68913 APPROVED
2012-10-05 WF.COP-(D2Mit29-D2Uwm13)/Uwm    WF.COP-(D2Mit29-D2Uwm13)/Uwm    Name updated 68913 APPROVED