Strain Report - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Advanced Search (OLGA)
Strain Registration

Strain: WF.WKY-(D5Uwm77-D5Uwm91)/Uwm

Symbol: WF.WKY-(D5Uwm77-D5Uwm91)/Uwm
Strain: WF.WKY-(D5Uwm77-D5Uwm91)
Substrain: Uwm
RGD ID: 6907104
Citation ID: RRID:RGD_6907104
Ontology ID: RS:0003363
Also Known As: WF.WKY-(D5Uwm77-D5Uwm91)/Uwm; WF.WKy-gUwm54-20/gUwm54-70; congenic line 5C-22
Type: congenic
Available Source: Not Available
Origination: University of Wisconsin School of Medicine, Madison, Wisconsin
Description: A sub congenic strain derived from the progenitor strain WF.WKY-(D5Uwm68-D5Mit4)/Uwm.
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2577,521,860 - 78,018,921RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0579,935,684 - 80,431,178RGD_MAPPER_PIPELINERnor6.0





Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

Phenotype Values via PhenoMiner     Click to see Annotation Detail View
Options:  View chart  |  Download data table  |  View expanded data table

Clinical Measurement
mammary tumor number

References

References - curated
# Reference Title Reference Citation
1. RGD Strain RSO annotation pipeline RGD Automated Pipelines
2. Mcs5c: a mammary carcinoma susceptibility locus located in a gene desert that associates with tenascin C expression. Veillet AL, etal., Cancer Prev Res (Phila). 2011 Jan;4(1):97-106.

Region

Position Markers

Flank 1 / 1 (D5Uwm77)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2577,521,860 - 77,522,160 (+)MAPPER
Rnor_6.0579,935,684 - 79,935,983NCBI
Cytogenetic Map5 RGD

Flank 2 / 1 (D5Uwm91)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2578,018,706 - 78,018,921 (+)MAPPER
Rnor_6.0580,430,964 - 80,431,178NCBI
Cytogenetic Map5 RGD

Additional Information