Strain Report - Rat Genome Database

Send us a Message



Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

Strain: WF.COP-(D2Uwm17-D2Rat16)/Uwm

Symbol: WF.COP-(D2Uwm17-D2Rat16)/Uwm
Strain: WF.COP-(D2Uwm17-D2Rat16)
Substrain: Uwm
RGD ID: 6903904
RRID: RGD_6903904
Ontology ID: RS:0003330
Also known as: WF.COP-(D2Uwm17-D2Rat16)/Uwm; WF.COP-D2Uwm17/D2Rat16; line T
Type: congenic
Source: University of Wisconsin, Madison, Wisconsin, USA
Origin: A segment of chromosome 2 was transferred from COP into the WF background.
Inbred Generations: F10
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2232,373,770 - 43,665,178RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0231,224,612 - 43,643,900RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0250,381,686 - 62,691,053RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4232,051,319 - 43,376,636RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
1. Haag JD, etal., Cancer Res 2003 Sep 15;63(18):5808-12.
2. RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D2Uwm17)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2232,373,770 - 32,374,088 (+)MAPPER
Rnor_6.0231,224,612 - 31,224,929NCBI
Rnor_5.0250,381,686 - 50,382,003UniSTS
RGSC_v3.4232,051,319 - 32,051,634RGD
RGSC_v3.4232,051,320 - 32,051,637UniSTS
RGSC_v3.1231,971,688 - 31,972,003RGD
Celera228,374,451 - 28,374,776UniSTS
Cytogenetic Map2 RGD

Flank 2 / 1 (D2Rat16)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2243,665,008 - 43,665,178 (+)MAPPER
Rnor_6.0243,643,731 - 43,643,900NCBI
Rnor_5.0262,690,884 - 62,691,053UniSTS
RGSC_v3.4243,376,466 - 43,376,635RGD
RGSC_v3.4243,376,467 - 43,376,636UniSTS
RGSC_v3.1243,304,699 - 43,304,868RGD
Celera239,447,656 - 39,447,823UniSTS
RH 3.4 Map2190.2UniSTS
RH 3.4 Map2190.2RGD
RH 2.0 Map2245.7RGD
SHRSP x BN Map218.4498RGD
FHH x ACI Map225.2699RGD

Additional Information