Strain Report - Rat Genome Database

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Strain: SS-Aceem1Mcwi

Symbol: SS-Aceem1Mcwi
Strain: SS-Aceem1
Substrain: Mcwi
RGD ID: 6484721
Citation ID: RRID:RGD_6484721
Ontology ID: RS:0003290
Alleles: Aceem1Mcwi
Also Known As: SS-Aceem1Mcwi; SS-Ace^[em1Mcwi]
Type: mutant
Available Source: Not Available
Origination: PhysGen Knockouts
Description: This strain was produced by injecting ZFNs targeting the sequence GAAACCCAACCTCGATGTCaccagtACAATGGTACAGAAG into SS/JrHsdMcwi rat embryos. The resulting mutation is a 7-bp deletion in exon 6.
Last Known Status: Live Animals; Cryopreserved Sperm (as of 2018-11-12)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21090,910,316 - 90,930,437RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01094,174,776 - 94,174,782RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01093,922,062 - 93,965,127RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41095,361,338 - 95,381,455RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
# Reference Title Reference Citation
1. Knockout rats via embryo microinjection of zinc-finger nucleases. Geurts AM, etal., Science. 2009 Jul 24;325(5939):433.
2. PhysGen Knockouts PhysGen Knockout strains
3. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Allelic Variants
Name Chromosome Start Pos End Pos Reference Nucleotide Variant Nucleotide Variant Type Assembly
Aceem1Mcwi-var1 chr10 94174776 94174782 GTCACCA - deletion Rnor_6.0

Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2014-04-03 SS-Aceem1Mcwi    SS-Aceem1Mcwi    Symbol updated 68687 APPROVED
2014-04-03 SS-Aceem1Mcwi    SS-Aceem1Mcwi    Symbol updated 68687 APPROVED
2014-04-03 SS-Aceem1Mcwi    SS-Aceem1Mcwi    Name updated 68913 APPROVED
2014-04-03 SS-Aceem1Mcwi    SS-Aceem1Mcwi    Name updated 68913 APPROVED
2013-08-15 SS-Aceem1Mcwi    SS-Aceem1Mcwi    Name updated 68913 APPROVED
2013-08-15 SS-Aceem1Mcwi    SS-Aceem1Mcwi    Name updated 68913 APPROVED