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Strain Registration

Strain: SS-Cubnem1Mcwi

Symbol: SS-Cubnem1Mcwi
Strain: SS-Cubnem1
Substrain: Mcwi
RGD ID: 6484713
Citation ID: RRID:RGD_6484713
Ontology ID: RS:0003282
Alleles: Cubnem1Mcwi
Previously known as: SS-Cubnem1Mcwi
Type: mutant
Source: PhysGen Knockouts
Origin: This strain was produced by injecting ZFNs targeting the sequence CGGGAGTACCTTCAGATTcatgatGGAGACTCCTCAGCG into SS/JrHsdMcwi rat embryos. The resulting mutation is a 13-bp deletion in exon 14.
Last Known Status: Cryopreserved Sperm (as of 2017-01-26)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21776,385,046 - 76,593,133RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01780,783,420 - 80,783,432RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01782,205,509 - 82,425,565RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41787,545,893 - 87,772,079RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
# Reference Title Reference Citation
1. Knockout rats via embryo microinjection of zinc-finger nucleases. Geurts AM, etal., Science. 2009 Jul 24;325(5939):433.
2. PhysGen Knockouts PhysGen Knockout strains
3. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Allelic Variants
Name Chromosome Start Pos End Pos Reference Nucleotide Variant Nucleotide Variant Type Assembly
Cubnem1Mcwi-var1 chr17 80783420 80783432 CTCCATCATGAAT - deletion Rnor_6.0

Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2014-04-03 SS-Cubnem1Mcwi    SS-Cubnem1Mcwi    Symbol updated 68687 APPROVED
2014-04-03 SS-Cubnem1Mcwi    SS-Cubnem1Mcwi    Symbol updated 68687 APPROVED
2014-04-03 SS-Cubnem1Mcwi    SS-Cubnem1Mcwi    Name updated 68913 APPROVED
2014-04-03 SS-Cubnem1Mcwi    SS-Cubnem1Mcwi    Name updated 68913 APPROVED
2013-08-15 SS-Cubnem1Mcwi    SS-Cubnem1Mcwi    Name updated 68913 APPROVED
2013-08-15 SS-Cubnem1Mcwi    SS-Cubnem1Mcwi    Name updated 68913 APPROVED