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Strain Registration

Strain: SS-Myadml2em5Mcwi

Symbol: SS-Myadml2em5Mcwi
Strain: SS-Myadml2em5
Substrain: Mcwi
RGD ID: 6484571
Citation ID: RRID:RGD_6484571
Ontology ID: RS:0003265
Alleles: Myadml2em5Mcwi
Also Known As: SS-Myadml2em5Mcwi; SS-Myadml2^[em5Mcwi]
Type: mutant
Available Source: Not Available
Origination: PhysGen Knockouts
Description: This strain was produced by injecting ZFNs targeting the sequence CTGATGGGCAGCACCATGgaccccCCGGGGGGTGCA into SS/JrHsdMcwi rat embryos. The resulting mutation is a 31-bp frameshift deletion in exon 1.
Last Known Status: Cryopreserved Sperm (as of 2017-01-26)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.210105,922,557 - 105,927,867RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.010109,825,513 - 109,827,143RGD_MAPPER_PIPELINERnor6.0
Rnor_5.010109,418,559 - 109,420,196RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.410110,039,330 - 110,040,967RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
# Reference Title Reference Citation
1. Knockout rats via embryo microinjection of zinc-finger nucleases. Geurts AM, etal., Science. 2009 Jul 24;325(5939):433.
2. PhysGen Knockouts PhysGen Knockout strains
3. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Allelic Variants
Name Chromosome Start Pos End Pos Reference Nucleotide Variant Nucleotide Variant Type Assembly
Myadml2em5Mcwi-var1 chr10 109825513 109827143 TTAAAGATTTATTTATTTATTATATATAAGTACACTGTAGCTCTCTTCAGACACACCAGAGGAGGGTATCGGATCCCCATTACAGATGGTTGTGAGCCACCATGTGGTTGCTGGAATTTGAACTCAGGACTTCTGGAAGAGTAGTCGGGTGCTCTTAACCACTGAGCCATCTCTCCAGCCCAAGTTGGCCGATTTCTAATTTACATTATCCCAGCTAAATGCTATCTCAAGACGCTGACACCGGCCCGCCTCTGAAGTCCATTTAGCTTTAATGTTCCCATCTGCAAAATGGATTATAACCGTATCTGCTCCAGAAAGTCCCCATTTGGTATGGTGACTAGCACCAAGCCCAGCAAAGGCCAGGAGACTGAGAAACAGGGAGACAGGAAGACTGAGAGTCTTTAGCCACACTCTTCCTTGCTCAGGACCTCCTGCCCCTCCATCCGAGAGCAGAATCGTCTGAGCCCCCCGACCTCCCTCTTCCTTCCCTATGTCTTAGTTCACCTTGGTCAGCTGTAGGTGCTCTCAGCCAGAGAGAGGAGATGGGCCATCGCTGGCCAGGCTACAGGGTGGGCACGAAGCGGATCCTCTGGGAGTAAGCGAGGTCTACGATGTAAAGGAGCAGGTTGACGTAGGTGAAAATAGCTACCACCAACTGGCTGTCCCAGGGGCAGCTGCCTCGGGGGCAGTCCGAGGGCCGCCCTGGCTCCCCGTACTTGGGGTCGAAACAGAAGACTGGCCAAATGACTGCGGCACTGAGGTATAGGAGCACAGCCAGGAAGGTATACACTACCACTAGGCGGTCAAACGGGCACCCCAGGCCCCCTGTGTGTCCCATCACACTTAGGACCACCACAGCCACTGTGGCCATGAAGCACAGGCTGTAGACAGCCACACACCACTGCGTGGCCACGTAGCGCCCGTAGCGACTCTCGTGGACAAGTGCTCCAAAGATGATGCAAGCCACAAAGGCCTGGACGATCTTAAGCAGCCCGGACACTGTAGCCATATAGCTGGCTACCTGACCTGGCCGGGCCCGAGTCAGGGCAACTTCAGCAGCATAGGCCAGAAAGAGGAGTCCTGCGAAGACGCTGGCTGCCAGGCGGAAGTTTCGGACCATACATCCGGCAGGCTCAGGTGGGCACTCCAGTCGGGTGAAGTACAGAGGGTAGATGACAGCGGCTGTGGCACACAGCAGGGTCGCCAACATGGCGAAGGCTGCTGTGAAGTTGCCCCAGGAAAGGCGCAGGCAGCTGTGGAGCCTTGTGAACTCACAGGCTACCACCAGGACCGAGAAGGCAAAACAGAAGCCCCAAGCAGCCATGCAGAAAGTGCCCTGCACGCCCCCAAAACCACCTCGGTGAGCAACCAAACTGAAAGTGGTACAGCCAAAGGCCAGTTGCAGCATTCGGGCTGTACCCACTGGTGAGGTCACAGCGCCTAAGTGCAGGTATGCACCCCCCGGGGGCTCCATGGTGCTGCCCATCAGGCTCTCTACTTCCCAGCCTCACCCTGTGCCCAGCTACCCTGGGGGTCTGCCCAGCTGAGAGACCTCTATCTTCCGCGGCAACAGCAGGTGCTGGCAGTCTGCAATGGCAGTGTTAACAGTGACATTGCAGCAGAACAGCTTC - deletion Rnor_6.0

Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2014-04-03 SS-Myadml2em5Mcwi    SS-Myadml2em5Mcwi    Name updated 68913 APPROVED
2014-04-03 SS-Myadml2em5Mcwi    SS-Myadml2em5Mcwi    Symbol updated 68687 APPROVED
2014-04-03 SS-Myadml2em5Mcwi    SS-Myadml2em5Mcwi    Name updated 68913 APPROVED
2014-04-03 SS-Myadml2em5Mcwi    SS-Myadml2em5Mcwi    Symbol updated 68687 APPROVED
2013-08-15 SS-Myadml2em5Mcwi    SS-Myadml2em5Mcwi    Name updated 68913 APPROVED