Strain Report - Rat Genome Database

Name: FHH-Chr 1 BN - Sorcs3 em1Mcwi
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Strain Registration

General

Strain: FHH-Chr 1^BN-Sorcs3^em1Mcwi

Symbol:

FHH-Chr 1^BN-Sorcs3^em1Mcwi

Strain:

FHH-Chr 1^BN-Sorcs3^em1

Substrain:

Mcwi

RGD ID:

6484567

Citation ID:

RRID:RGD_6484567

Ontology ID:

RS:0003261

Alleles:

Sorcs3^em1Mcwi

Previously known as:

FHH-Chr 1-BN-Sorcs3em1Mcwi; FHH-Chr 1BN-Sorcs3em1Mcwi

Type:

mutant

Source:

PhysGen Knockouts

Origin:

This strain was produced by injecting ZFNs targeting the sequence TGCCCGCTCCATTGAcatcagtTCCCTGGTCGTCCAGGAT into FHH-Chr 1BN/Mcwi rat embryos. The resulting mutation is a 33-bp insertion in exon 7

Last Known Status:

Cryopreserved Sperm (as of 2017-01-26)

Position

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	1	247,099,178 - 247,734,027	RGD_MAPPER_PIPELINE	mRatBN7.2
Rnor_6.0	1	267,986,305 - 268,620,331	RGD_MAPPER_PIPELINE	Rnor6.0
Rnor_5.0	1	275,416,357 - 276,060,204	RGD_MAPPER_PIPELINE	Rnor5.0
RGSC_v3.4	1	254,125,935 - 254,345,330	RGD_MAPPER_PIPELINE	RGSC3.4

Annotation Click to see Annotation Detail View

References

References - curated

#	Reference Title	Reference Citation
1.	Knockout rats via embryo microinjection of zinc-finger nucleases.	Geurts AM, etal., Science. 2009 Jul 24;325(5939):433.
2.	PhysGen Knockouts	PhysGen Knockout strains
3.	RGD Strain RSO annotation pipeline	RGD Automated Pipelines

Region

Additional Information

Nomenclature History

Date	Current Symbol	Previous Symbol	Description	Reference	Status
2014-03-31	FHH-Chr 1^BN-Sorcs3^em1Mcwi	FHH-Chr 1^BN-Sorcs3^em1Mcwi	Name updated	68913	APPROVED
2014-03-31	FHH-Chr 1^BN-Sorcs3^em1Mcwi	FHH-Chr 1^BN-Sorcs3^em1Mcwi	Symbol updated	68687	APPROVED
2014-03-31	FHH-Chr 1^BN-Sorcs3^em1Mcwi	FHH-Chr 1^BN-Sorcs3^em1Mcwi	Name updated	68913	APPROVED
2014-03-31	FHH-Chr 1^BN-Sorcs3^em1Mcwi	FHH-Chr 1^BN-Sorcs3^em1Mcwi	Symbol updated	68687	APPROVED
2013-08-15	FHH-Chr 1^BN-Sorcs3^em1Mcwi	FHH-Chr 1^BN-Sorcs3^em1Mcwi	Name updated	68913	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Strain: FHH-Chr 1BN-Sorcs3em1Mcwi

Strain: FHH-Chr 1^BN-Sorcs3^em1Mcwi