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Strain Registration

Strain: SS.BN-(D13Mgh13-D13Mit4)/Mcwi

Symbol: SS.BN-(D13Mgh13-D13Mit4)/Mcwi
Strain: SS.BN-(D13Mgh13-D13Mit4)
Substrain: Mcwi
RGD ID: 629519
Citation ID: RRID:RGD_629519
Ontology ID: RS:0000814
Also Known As: SS.BN-(D13Mgh13-D13Mit4)/Mcwi
Type: congenic
Available Source: Not Available
Origination: PhysGen
Description: A cross of SS and BN strains which results in a SS genomic background with a BN chromosome introgressed
Coat Color: albino
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21331,241,331 - 86,800,898RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01336,147,533 - 92,916,783RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01341,256,240 - 97,381,801RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41390,551,150 - 90,551,272RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
# Reference Title Reference Citation
1. PhysGen Strains PhysGen strains
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D13Mgh13)
Rat AssemblyChrPosition (strand)Source
GRCr81333,794,096 - 33,794,229 (+)Marker Load Pipeline
mRatBN7.21331,241,331 - 31,241,464 (+)MAPPER
Rnor_6.01336,147,533 - 36,147,665NCBI
Rnor_5.01341,256,240 - 41,256,372UniSTS
Celera1331,125,422 - 31,125,560UniSTS
Cytogenetic Map13q13UniSTS

Flank 2 / 1 (D13Mit4)
Rat AssemblyChrPosition (strand)Source
GRCr81389,333,129 - 89,333,251 (+)Marker Load Pipeline
mRatBN7.21386,800,776 - 86,800,898 (+)MAPPER
Rnor_6.01392,916,662 - 92,916,783NCBI
Rnor_5.01397,381,680 - 97,381,801UniSTS
RGSC_v3.41390,551,150 - 90,551,272RGD
RGSC_v3.41390,551,151 - 90,551,272UniSTS
RGSC_v3.11390,740,035 - 90,740,156RGD
Celera1386,401,644 - 86,401,765UniSTS
RH 3.4 Map13573.9UniSTS
RH 3.4 Map13573.9RGD
RH 2.0 Map13638.1RGD
SHRSP x BN Map1340.7498RGD
Cytogenetic Map13q24UniSTS

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_life_disease The blood pressure of females is 113 mmHg and of males is 119 mmHg. 629526
strain_other The average weight of females is 200g and of males 290g. 629526