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Strain Registration

Strain: DA.F344-Aia1/3

Symbol: DA.F344-Aia1/3
Strain: DA, F344
RGD ID: 629493
Citation ID: RRID:RGD_629493
Ontology ID: RS:0000222
Type: congenic
Available Source: Not Available
Origination: National Institute of Arthritis and Musculoskeletal and Skin Diseases, NIH, Bethesda, Maryland
Description: genomic segments with region of interest from chr 4 were inserted to DA strain
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2456,698,790 - 56,698,927RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0455,375,865 - 55,376,001RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0455,118,586 - 55,118,722RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4454,879,077 - 54,879,214RGD_MAPPER_PIPELINERGSC3.4





Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype
joint swelling  (IAGP)

References

References - curated
# Reference Title Reference Citation
1. Evaluation of quantitative trait loci regulating severity of mycobacterial adjuvant-induced arthritis in monocongenic and polycongenic rats: identification of a new regulatory locus on rat chromosome 10 and evidence of overlap with rheumatoid arthritis susceptibility loci. Joe B, etal., Arthritis Rheum 2002 Apr;46(4):1075-85.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D4Mgh15)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2456,698,790 - 56,698,927 (+)MAPPER
Rnor_6.0455,375,865 - 55,376,001NCBI
Rnor_5.0455,118,586 - 55,118,722UniSTS
RGSC_v3.4454,879,077 - 54,879,214RGD
RGSC_v3.4454,879,078 - 54,879,214UniSTS
RGSC_v3.1455,129,235 - 55,129,371RGD
Celera451,815,819 - 51,815,955UniSTS
RH 3.4 Map4301.72UniSTS
RH 3.4 Map4301.72RGD
Cytogenetic Map4q22UniSTS

Flank 2 / 1 (D4Arb2)
Rat AssemblyChrPosition (strand)Source
Celera4154,400,714 - 154,401,111UniSTS
Cytogenetic Map4q42UniSTS

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_characteristics In this congenic strain the score of arthritis is 75% higher 625379