Strain Report - Rat Genome Database

Send us a Message

Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   

Strain: SS-Sh2b3em1Mcwi-/+

Symbol: SS-Sh2b3em1Mcwi-/+
Strain: SS-Sh2b3em1-/Sh2b3em1+
Substrain: Mcwi
Full Name: SS-Sh2b3em1Mcwi-/Sh2b3em1Mcwi+
RGD ID: 5686322
RRID: RGD_5686322
Ontology ID: RS:0003031
Alleles: Sh2b3em1Mcwi
Also known as: SS-Sh2b3em1Mcwi-/+; SS-Sh2b3em1Mcwi/2Mcwi; SS-Sh2b3em1Mcwi/2Mcwi; SS-Sh2b3em1Mcwi-/Sh2b3em1Mcwi+
Type: mutant
Source: PhysGen Knockouts
Origin: ZFN mutant founders were backcrossed with SS/JrHsdMcwi to get heterozygous offsprings which were intercrossed and offsprings maintained as homozygous and heterozygous breeders.
Genetic Status: Heterozygous
Last Known Status: Live Animals; Cryopreserved Sperm (as of 2019-07-26)
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21234,749,849 - 34,753,616RGD_MAPPER_PIPELINE
Rnor_6.01240,261,990 - 40,265,757RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01242,132,947 - 42,136,714RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41235,954,679 - 35,958,446RGD_MAPPER_PIPELINERGSC3.4


References - curated
1. Geurts AM, etal., Science. 2009 Jul 24;325(5939):433.
2. PhysGen Knockout strains
3. RGD Automated Pipelines


Rat Variants
Name Chromosome Start Pos End Pos Reference Nucleotide Variant Nucleotide Variant Type
Sh2b3em1Mcwi-var1 chr12 40262913 40262918 CACTTG - deletion

Additional Information

Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2014-03-26 SS-Sh2b3em1Mcwi-/+  SS-Sh2b3em1Mcwi-/Sh2b3em1Mcwi+  SS-Sh2b3em1Mcwi-/+  SS-Sh2b3em1Mcwi-/Sh2b3em1Mcwi+  Symbol and/or name change 68913 APPROVED
2012-01-26 SS-Sh2b3em1Mcwi-/+  SS-Sh2b3em1Mcwi-/Sh2b3em1Mcwi+  SS-Sh2b3em1Mcwi-/+  SS-Sh2b3em1Mcwi-/Sh2b3em1Mcwi+  Name updated 68913 APPROVED