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Strain Registration

Strain: SS-Slc30a8em2Mcwi

Symbol: SS-Slc30a8em2Mcwi
Strain: SS-Slc30a8em2
Substrain: Mcwi
RGD ID: 5131990
Citation ID: RRID:RGD_5131990
Ontology ID: RS:0002602
Alleles: Slc30a8em2Mcwi
Also Known As: SS-Slc30a8em2Mcwi; SS-Slc30a8^[em2Mcwi]
Type: mutant
Available Source: Not Available
Origination: PhysGen Knockouts
Description: This strain was produced by injecting ZFNs targeting the sequence TATCACTGCCACAACagcttcAAGGCCACAGGGAACAGGTC into SS/JrHsdMcwi rat embryos. The resulting mutation is a 17-bp frameshift deletion in exon 2.
Last Known Status: Cryopreserved Sperm (as of 2017-01-26)
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2783,603,467 - 83,603,483RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0791,832,988 - 91,869,329RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0792,476,024 - 92,512,365RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4788,583,770 - 88,617,145RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
# Reference Title Reference Citation
1. Knockout rats via embryo microinjection of zinc-finger nucleases. Geurts AM, etal., Science. 2009 Jul 24;325(5939):433.
2. PhysGen Knockouts PhysGen Knockout strains
3. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Allelic Variants
Name Chromosome Start Pos End Pos Reference Nucleotide Variant Nucleotide Variant Type Assembly
Slc30a8em2Mcwi-var1 chr7 83603467 83603483 CTGCCACAACAGCTTCA - deletion mRatBN7.2

Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2014-03-26 SS-Slc30a8em2Mcwi    SS-Slc30a8em2Mcwi    Symbol updated 68687 APPROVED
2014-03-26 SS-Slc30a8em2Mcwi    SS-Slc30a8em2Mcwi    Symbol updated 68687 APPROVED
2014-03-26 SS-Slc30a8em2Mcwi    SS-Slc30a8em2Mcwi    Name updated 68913 APPROVED
2014-03-26 SS-Slc30a8em2Mcwi    SS-Slc30a8em2Mcwi    Name updated 68913 APPROVED
2013-08-13 SS-Slc30a8em2Mcwi    SS-Slc30a8em2Mcwi    Name updated 68913 APPROVED
2013-08-13 SS-Slc30a8em2Mcwi    SS-Slc30a8em2Mcwi    Name updated 68913 APPROVED