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Strain Registration

Strain: SS.SR-(D9Mco72-Resp18)/Mco

Symbol: SS.SR-(D9Mco72-Resp18)/Mco
Strain: SS.SR-(D9Mco72-Resp18)
Substrain: Mco
RGD ID: 4891396
Citation ID: RRID:RGD_4891396
Ontology ID: RS:0002545
Also Known As: SS.SR-(D9Mco72-Resp18)/Mco; S.R-(D9Mco72-Resp18)
Type: congenic
Available Source: Not Available
Origination: Medical College of Ohio, Toledo, Ohio
Description: SS.SR-(D9Mco95-Resp18)/Mco was crossed with SS/Jr to generate F1 which were intercrossed to generate F2, these were genotyped using markers throughout 73140156-74554694 region
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2947,902,208 - 76,771,824RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0952,686,874 - 82,477,136RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0952,352,690 - 82,246,695RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4944,842,118 - 74,558,151RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
# Reference Title Reference Citation
1. Defining a rat blood pressure quantitative trait locus to a <81.8 kb congenic segment: comprehensive sequencing and renal transcriptome analysis. Gopalakrishnan K, etal., Physiol Genomics. 2010 Sep;42A(2):153-61. Epub 2010 Aug 17.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D9Mco72)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2947,902,208 - 47,902,417 (+)MAPPER
Rnor_6.0952,686,874 - 52,687,080NCBI
Rnor_5.0952,352,690 - 52,352,896UniSTS
RGSC_v3.4944,842,118 - 44,842,324UniSTS
Celera945,571,224 - 45,571,428UniSTS
Cytogenetic Map9 RGD

Flank 2 / 1 (Resp18)
Rat AssemblyChrPosition (strand)Source
GRCr8984,213,844 - 84,220,186 (-)NCBI
mRatBN7.2976,765,179 - 76,771,824 (-)NCBI
mRatBN7.2 Ensembl976,764,590 - 76,778,722 (-)Ensembl
UTH_Rnor_SHR_Utx985,209,715 - 85,216,056 (-)NCBI
UTH_Rnor_SHRSP_BbbUtx_1.0990,338,603 - 90,344,944 (-)NCBI
UTH_Rnor_WKY_Bbb_1.0988,724,817 - 88,731,158 (-)NCBI
Rnor_6.0982,470,794 - 82,477,136 (-)NCBI
Rnor_6.0 Ensembl982,470,759 - 82,477,181 (-)Ensembl
Rnor_5.0982,240,055 - 82,246,695 (-)NCBI
RGSC_v3.4974,551,809 - 74,558,151 (-)NCBI
RGSC_v3.1974,698,790 - 74,705,133 (-)NCBI
Celera974,335,568 - 74,341,910 (-)NCBI
Cytogenetic Map9q33NCBI

Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2011-01-12 SS.SR-(D9Mco72-Resp18)/Mco    SS.SR-(D9Mco72-Resp18)/Mco    Name updated 68913 APPROVED
2011-01-12 SS.SR-(D9Mco72-Resp18)/Mco    SS.SR-(D9Mco72-Resp18)/Mco    Name updated 68913 APPROVED