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Strain Registration

Strain: SS.SR-(D9Mco101-Resp18)/Mco

Symbol: SS.SR-(D9Mco101-Resp18)/Mco
Strain: SS.SR-(D9Mco101-Resp18)
Substrain: Mco
RGD ID: 4891394
Citation ID: RRID:RGD_4891394
Ontology ID: RS:0002544
Previously known as: SS.SR-(D9Mco101-Resp18)/Mco; S.R(D9Mco101-Resp18)
Type: congenic
Source: Medical College of Ohio, Toledo, Ohio
Origin: SS.SR-(D9Mco95-Resp18)/Mco was crossed with SS/Jr to generate F1 which were intercrossed to generate F2, these were genotyped using markers throughout 73140156-74554694 region
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2976,145,766 - 76,771,824RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0981,847,677 - 82,477,136RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0981,611,825 - 82,246,695RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4974,551,809 - 74,558,151RGD_MAPPER_PIPELINERGSC3.4





Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

References

References - curated
# Reference Title Reference Citation
1. Defining a rat blood pressure quantitative trait locus to a <81.8 kb congenic segment: comprehensive sequencing and renal transcriptome analysis. Gopalakrishnan K, etal., Physiol Genomics. 2010 Sep;42A(2):153-61. Epub 2010 Aug 17.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D9Mco101)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2976,145,766 - 76,145,986 (+)MAPPER
Rnor_6.0981,847,677 - 81,847,894NCBI
Rnor_5.0981,611,825 - 81,612,042UniSTS
Celera973,718,901 - 73,719,119UniSTS
Cytogenetic Map9q33UniSTS

Flank 2 / 1 (Resp18)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2976,765,179 - 76,771,824 (-)NCBI
mRatBN7.2 Ensembl976,764,590 - 76,778,722 (-)Ensembl
UTH_Rnor_SHR_Utx985,209,715 - 85,216,056 (-)NCBI
UTH_Rnor_SHRSP_BbbUtx_1.0990,338,603 - 90,344,944 (-)NCBI
UTH_Rnor_WKY_Bbb_1.0988,724,817 - 88,731,158 (-)NCBI
Rnor_6.0982,470,794 - 82,477,136 (-)NCBI
Rnor_6.0 Ensembl982,470,759 - 82,477,181 (-)Ensembl
Rnor_5.0982,240,055 - 82,246,695 (-)NCBI
RGSC_v3.4974,551,809 - 74,558,151 (-)NCBI
RGSC_v3.1974,698,790 - 74,705,133 (-)NCBI
Celera974,335,568 - 74,341,910 (-)NCBI
Cytogenetic Map9q33NCBI

Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2011-03-24 SS.SR-(D9Mco101-Resp18)/Mco    SS.SR-(D9Mco101-Resp18)/Mco    Name updated 68913 APPROVED