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Strain: SS.SR-(D9Mco98-Resp18)/2Mco

Symbol: SS.SR-(D9Mco98-Resp18)/2Mco
Strain: SS.SR-(D9Mco98-Resp18)/2
Substrain: Mco
RGD ID: 4891386
Citation ID: RRID:RGD_4891386
Ontology ID: RS:0001717
Also Known As: SS.SR-(D9Mco98-Resp18)/2Mco; S.R(D9Mco98-Resp18-2)
Type: congenic
Available Source: Not Available
Origination: Medical College of Ohio, Toledo, Ohio
Description: SS.SR-(D9Mco95-Resp18)/Mco was crossed with SS/Jr to generate F1 which were intercrossed to generate F2, these were genotyped using markers throughout 73140156-74554694 region
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2975,481,963 - 76,771,824RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0981,179,848 - 82,477,136RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0980,945,872 - 82,246,695RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4974,551,809 - 74,558,151RGD_MAPPER_PIPELINERGSC3.4





Disease Annotations     Click to see Annotation Detail View
hypertension  (IAGP)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

References

References - curated
# Reference Title Reference Citation
1. Defining a rat blood pressure quantitative trait locus to a <81.8 kb congenic segment: comprehensive sequencing and renal transcriptome analysis. Gopalakrishnan K, etal., Physiol Genomics. 2010 Sep;42A(2):153-61. Epub 2010 Aug 17.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D9Mco98)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2975,481,963 - 75,482,161 (+)MAPPER
Rnor_6.0981,179,848 - 81,180,041NCBI
Rnor_5.0980,945,872 - 80,946,065UniSTS
Celera973,058,807 - 73,059,000UniSTS
Cytogenetic Map9 RGD

Flank 2 / 1 (Resp18)
Rat AssemblyChrPosition (strand)Source
GRCr8984,213,844 - 84,220,186 (-)NCBI
mRatBN7.2976,765,179 - 76,771,824 (-)NCBI
mRatBN7.2 Ensembl976,764,590 - 76,778,722 (-)Ensembl
UTH_Rnor_SHR_Utx985,209,715 - 85,216,056 (-)NCBI
UTH_Rnor_SHRSP_BbbUtx_1.0990,338,603 - 90,344,944 (-)NCBI
UTH_Rnor_WKY_Bbb_1.0988,724,817 - 88,731,158 (-)NCBI
Rnor_6.0982,470,794 - 82,477,136 (-)NCBI
Rnor_6.0 Ensembl982,470,759 - 82,477,181 (-)Ensembl
Rnor_5.0982,240,055 - 82,246,695 (-)NCBI
RGSC_v3.4974,551,809 - 74,558,151 (-)NCBI
RGSC_v3.1974,698,790 - 74,705,133 (-)NCBI
Celera974,335,568 - 74,341,910 (-)NCBI
Cytogenetic Map9q33NCBI

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_other Increased blood pressure is due to the 1.33 Mb interval distal to the 81.8 kb region (allele of the SR/Jr) 4889902

Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2011-03-24 SS.SR-(D9Mco98-Resp18)/2Mco    SS.SR-(D9Mco98-Resp18)/2Mco    Name updated 68913 APPROVED