Strain Report - Rat Genome Database

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Strain: SS.LEW-(D3Rat52-D3Chm57)/Ayd

Symbol: SS.LEW-(D3Rat52-D3Chm57)/Ayd
Strain: SS.LEW-(D3Rat52-D3Chm57)
Substrain: Ayd
RGD ID: 2325796
Citation ID: RRID:RGD_2325796
Ontology ID: RS:0002416
Previously known as: SS.LEW-(D3Rat52-D3Chm57)/Ayd; DSS.LEW-(D3Rat52-D3Chm57)/Lt; C3S.L8
Type: congenic
Source: Research Centre-CHUM, Montreal, Quebec, Canada
Origin: A sub congenic strain derived from the progenitor strain SS.LEW-(D3Rat52-D3Rat130)/Ayd
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2318,311,454 - 28,441,896RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0314,090,411 - 29,084,626RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0319,410,399 - 34,290,625RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4314,051,872 - 24,716,931RGD_MAPPER_PIPELINERGSC3.4





References


Region

Position Markers

Flank 1 / 1 (D3Rat52)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2318,311,454 - 18,311,610 (+)MAPPER
Rnor_6.0314,090,411 - 14,090,566NCBI
Rnor_5.0319,410,399 - 19,410,554UniSTS
RGSC_v3.4314,051,872 - 14,052,028RGD
RGSC_v3.4314,051,873 - 14,052,028UniSTS
RGSC_v3.1313,948,245 - 13,948,400RGD
Celera313,028,531 - 13,028,700UniSTS
RH 3.4 Map3157.8RGD
RH 3.4 Map3157.8UniSTS
RH 2.0 Map347.5RGD
SHRSP x BN Map34.6298RGD
Cytogenetic Map3p11UniSTS

Flank 2 / 1 (D3Chm57)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2328,441,673 - 28,441,896 (+)MAPPER
Rnor_6.0329,084,404 - 29,084,626NCBI
Rnor_5.0334,290,403 - 34,290,625UniSTS
RGSC_v3.4324,716,708 - 24,716,931RGD
RGSC_v3.4324,716,709 - 24,716,931UniSTS
Celera326,752,816 - 26,753,039UniSTS
Cytogenetic Map3q12UniSTS
Strain QTL Data
Symbol Name Trait
Bp345 Blood pressure QTL 345 arterial blood pressure trait   (VT:2000000)    

Additional Information