Strain Report - Rat Genome Database

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Strain: AT.ANT-(D1Rat35-D1Rat288)/Rar

Symbol: AT.ANT-(D1Rat35-D1Rat288)/Rar
Strain: AT.ANT-(D1Rat35-D1Rat288)
Substrain: Rar
RGD ID: 2317819
Citation ID: RRID:RGD_2317819
Ontology ID: RS:0002399
Also Known As: AT.ANT-(D1Rat35-D1Rat288)/Rar;AT.ANT-T1;IAT.IANT-T1; AT.ANT-(D1Rat35-D1Rat288)/Rar
Type: congenic
Available Source: Not Available
Origination: University of Colorado Denver, Colorado
Description: This sub-congenic was developed by crossing AT.ANT-(D1Rat234-D1Rat288)/Rar with AT
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21123,479,780 - 123,479,925RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01130,917,121 - 130,917,265RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01131,958,920 - 211,567,839RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41124,748,920 - 192,038,535RGD_MAPPER_PIPELINERGSC3.4





Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

References

References - curated
# Reference Title Reference Citation
1. A major QTL for acute ethanol sensitivity in the alcohol tolerant and non-tolerant selected rat lines. Radcliffe RA, etal., Genes Brain Behav. 2009 May 25.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D1Rat35)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21123,479,780 - 123,479,925 (+)MAPPER
Rnor_6.01130,917,121 - 130,917,265NCBI
Rnor_5.01131,958,920 - 131,959,064UniSTS
RGSC_v3.41124,748,920 - 124,749,065RGD
RGSC_v3.41124,748,921 - 124,749,065UniSTS
RGSC_v3.11124,827,264 - 124,827,408RGD
Celera1115,650,615 - 115,650,759UniSTS
RH 3.4 Map11454.0UniSTS
RH 3.4 Map11454.0RGD
SHRSP x BN Map159.42UniSTS
SHRSP x BN Map159.42RGD
Cytogenetic Map1 RGD

Flank 2 / 1 (D1Rat288)
Rat AssemblyChrPosition (strand)Source
Rnor_5.01211,567,685 - 211,567,839NCBI
RGSC_v3.41192,038,382 - 192,038,535RGD
RGSC_v3.11192,188,263 - 192,188,416RGD
SHRSP x BN Map194.7699RGD
SHRSP x BN Map194.7699UniSTS

Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2014-11-03 AT.ANT-(D1Rat35-D1Rat288)/Rar    AT.ANT-(D1Rat35-D1Rat228)/Rar    Symbol updated 68687 APPROVED
2014-11-03 AT.ANT-(D1Rat35-D1Rat288)/Rar    AT.ANT-(D1Rat35-D1Rat228)/Rar    Name updated 68913 APPROVED
2014-11-03 AT.ANT-(D1Rat35-D1Rat288)/Rar    AT.ANT-(D1Rat35-D1Rat228)/Rar    Symbol updated 68687 APPROVED
2014-11-03 AT.ANT-(D1Rat35-D1Rat288)/Rar    AT.ANT-(D1Rat35-D1Rat228)/Rar    Name updated 68913 APPROVED