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Strain Registration

Strain: AT.ANT-(D1Rat273-D1Rat158)/Rar

Symbol: AT.ANT-(D1Rat273-D1Rat158)/Rar
Strain: AT.ANT-(D1Rat273-D1Rat158)
Substrain: Rar
RGD ID: 2317814
Citation ID: RRID:RGD_2317814
Ontology ID: RS:0002394
Also Known As: AT.ANT-(D1Rat273-D1Rat158)/Rar;AT.ANT-T11;IAT.IANT-T11; AT.ANT-(D1Rat273-D1Rat158)/Rar
Type: congenic
Available Source: Not Available
Origination: University of Colorado Denver, Colorado
Description: This sub-congenic was developed by crossing AT.ANT-(D1Rat234-D1Rat228)/Rar with AT
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21138,344,856 - 150,700,247RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01146,507,930 - 161,321,256RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01147,436,666 - 167,535,765RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41140,644,473 - 153,578,547RGD_MAPPER_PIPELINERGSC3.4





Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

References

References - curated
# Reference Title Reference Citation
1. A major QTL for acute ethanol sensitivity in the alcohol tolerant and non-tolerant selected rat lines. Radcliffe RA, etal., Genes Brain Behav. 2009 May 25.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D1Rat273)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21138,344,856 - 138,345,017 (+)MAPPER
Rnor_6.01146,507,930 - 146,508,090NCBI
Rnor_5.01147,436,666 - 147,436,826UniSTS
RGSC_v3.41140,644,473 - 140,644,634RGD
RGSC_v3.41140,644,474 - 140,644,634UniSTS
RGSC_v3.11140,722,879 - 140,723,040RGD
Celera1130,363,335 - 130,363,495UniSTS
SHRSP x BN Map171.12RGD
SHRSP x BN Map171.12UniSTS
Cytogenetic Map1q31UniSTS

Flank 2 / 1 (D1Rat158)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21150,700,142 - 150,700,247 (+)MAPPER
Rnor_6.01161,321,152 - 161,321,256NCBI
Rnor_5.01167,535,661 - 167,535,765UniSTS
RGSC_v3.41153,578,442 - 153,578,547RGD
RGSC_v3.41153,578,443 - 153,578,547UniSTS
RGSC_v3.11153,656,849 - 153,656,953RGD
Celera1148,805,912 - 148,806,016UniSTS
Celera1148,807,683 - 148,807,801UniSTS
RH 3.4 Map11164.0RGD
RH 3.4 Map11164.0UniSTS
RH 2.0 Map1772.7RGD
SHRSP x BN Map175.6399RGD
FHH x ACI Map169.95RGD
Cytogenetic Map1q32UniSTS

Additional Information