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Strain Registration

Strain: SHR.BN-(D6Rat40-D6Rat170)/Mco

Symbol: SHR.BN-(D6Rat40-D6Rat170)/Mco
Strain: SHR.BN-(D6Rat40-D6Rat170)
Substrain: Mco
RGD ID: 2316927
Citation ID: RRID:RGD_2316927
Ontology ID: RS:0002377
Also Known As: SHR.BN-(D6Rat40-D6Rat170)/Mco; SHR.BN6
Type: congenic
Available Source: Not Available
Origination: Medical College of Ohio, Toledo, Ohio, USA
Description: 45.5 Mb region of BN/SsNHsd is introgressed into the genomic background of SHR/NHsd
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2616,536,243 - 45,547,114RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.061,120,393 - 48,179,481RGD_MAPPER_PIPELINERnor6.0
Rnor_5.061,111,498 - 56,881,356RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.461,301,952 - 46,792,623RGD_MAPPER_PIPELINERGSC3.4





Disease Annotations     Click to see Annotation Detail View
Hyperplasia  (IAGP)

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

References

References - curated
# Reference Title Reference Citation
1. Neointimal hyperplasia and vasoreactivity are controlled by genetic elements on rat chromosome 3. Nestor Kalinoski AL, etal., Hypertension. 2010 Feb;55(2):555-61. Epub 2009 Dec 21.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D6Rat40)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2616,536,243 - 16,536,392 (-)MAPPER
Rnor_6.061,120,393 - 1,120,541NCBI
Rnor_5.061,111,498 - 1,111,646UniSTS
RGSC_v3.461,301,952 - 1,302,101RGD
RGSC_v3.461,301,953 - 1,302,101UniSTS
RGSC_v3.161,301,953 - 1,302,101RGD
Celera616,183,650 - 16,183,798UniSTS
RH 3.4 Map629.0UniSTS
RH 3.4 Map629.0RGD
RH 2.0 Map6124.4RGD
SHRSP x BN Map618.3798RGD
Cytogenetic Map6q11UniSTS

Flank 2 / 1 (D6Rat170)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2645,546,875 - 45,547,114 (+)MAPPER
Rnor_6.0648,179,243 - 48,179,481NCBI
Rnor_5.0656,881,118 - 56,881,356UniSTS
RGSC_v3.4646,792,384 - 46,792,623RGD
RGSC_v3.4646,792,385 - 46,792,623UniSTS
RGSC_v3.1646,795,510 - 46,795,749RGD
Celera644,768,766 - 44,769,014UniSTS
SHRSP x BN Map634.1598RGD
SHRSP x BN Map634.1598UniSTS

Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2010-03-02 SHR.BN-(D6Rat40-D6Rat170)/Mco    SHR.BN-(D6Rat40-D6Rat170)/Mco    Name updated 68913 APPROVED
2010-03-02 SHR.BN-(D6Rat40-D6Rat170)/Mco    SHR.BN-(D6Rat40-D6Rat170)/Mco    Name updated 68913 APPROVED