Strain Report - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Strain Registration

Strain: SHR.WKY-(D15Tkyo3-D15Rat68)/Tkyo

Symbol: SHR.WKY-(D15Tkyo3-D15Rat68)/Tkyo
Strain: SHR.WKY-(D15Tkyo3-D15Rat68)
Substrain: Tkyo
RGD ID: 2306099
Citation ID: RRID:RGD_2306099
Ontology ID: RS:0002167
Also Known As: SHR.WKY-(D15Tkyo3-D15Rat68)/Tkyo; 15SW1; NBRP Rat No: 0518; SHR.WKY-(D15Tkyo3-D15Rat68)/Tkyo
Type: congenic
Available Source: National BioResource Project for the Rat in Japan
Origination: National BioResource Project for the Rat in Japan
Description: This congenic strain was established from WKY/Izm purchased from Japan SLC, Inc. and SHR/Izm at the Research Institute International Medical Center of Japan in 2001. The rats which have the heterozygous consomic segment were established in 2004, and were bred homozygous in 2005.
Coat Color: Albino
Inbred Generations: F7
Last Known Status: Cryopreserved Sperm
Research Usage Diabetes Obesity; Cardio Hypertension
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21556,484,420 - 56,484,560RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01563,498,932 - 63,499,071RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01567,139,660 - 67,139,799RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41562,521,452 - 62,521,592RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
# Reference Title Reference Citation
1. Strains registered by the National Bio Resource Project for the Rat in Japan Personal Communication with NBRP
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 2 / 1 (D15Rat68)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21556,484,420 - 56,484,560 (+)MAPPER
Rnor_6.01563,498,932 - 63,499,071NCBI
Rnor_5.01567,139,660 - 67,139,799UniSTS
RGSC_v3.41562,521,452 - 62,521,592RGD
RGSC_v3.41562,521,453 - 62,521,592UniSTS
RGSC_v3.11562,537,233 - 62,537,372RGD
Celera1556,046,905 - 56,047,044UniSTS
RH 3.4 Map15424.0UniSTS
RH 3.4 Map15424.0RGD
RH 2.0 Map15358.3RGD
SHRSP x BN Map1539.1498RGD
FHH x ACI Map1547.47RGD

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_reproduction Maintained in homozygous condition. Sib mating. 1302502

Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-05-29 SHR.WKY-(D15Tkyo3-D15Rat68)/Tkyo    SHR.WKY-(D15Tkyo3-D15Rat68)/Tkyo    Name updated 68913 APPROVED
2012-05-29 SHR.WKY-(D15Tkyo3-D15Rat68)/Tkyo    SHR.WKY-(D15Tkyo3-D15Rat68)/Tkyo    Name updated 68913 APPROVED