Strain Report - Rat Genome Database

Send us a Message
Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes Variants Community Projects QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer)
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease Coronavirus Disease Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models Rat PhenoMiner (Quantitative Phenotypes) Chinchilla PhenoMiner Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Presentations Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Strain Registration

Strain: F344.OLETF-(D11Mgh4-D11Mgh1)/2Tj

Symbol: F344.OLETF-(D11Mgh4-D11Mgh1)/2Tj
Strain: F344.OLETF-(D11Mgh4-D11Mgh1)/2
Substrain: Tj
RGD ID: 2306016
Citation ID: RRID:RGD_2306016
Ontology ID: RS:0001937
Also Known As: F344.OLETF-(D11Mgh4-D11Mgh1)/2Tj; F.O-Nidd4OF/2Tj; Nidd4NS; F.O-Nidd4OF/2Tj; NBRP Rat No: 0426; F344.OLETF-(D11Mgh4-D11Mgh1)/2Tj
Type: congenic
Available Source: National BioResource Project for the Rat in Japan
Origination: National BioResource Project for the Rat in Japan
Description: Developed by the DEPOSITOR
Coat Color: Albino
Inbred Generations: F5
Last Known Status: Cryopreserved Embryo
Research Usage Diabetes Obesity
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21159,802,622 - 82,566,702RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01162,653,194 - 86,714,631RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01165,784,365 - 89,808,503RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41161,504,311 - 84,560,241RGD_MAPPER_PIPELINERGSC3.4





Phenotype Values via Phenominer Click to see Annotation Detail View

Related Phenotype Data for Term "F344.OLETF-(D11Mgh4-D11Mgh1)/2Tj" (RS:0001937)

Rat Strains:
Clinical Measurements:
Experimental Conditions:
Measurement Methods:

Phenotype Values via PhenoMiner     Click to see Annotation Detail View
Options:  View chart  |  Download data table  |  View expanded data table


References

References - curated
# Reference Title Reference Citation
1. Strains registered by the National Bio Resource Project for the Rat in Japan Personal Communication with NBRP
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D11Mgh4)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21159,802,622 - 59,802,794 (+)MAPPER
Rnor_6.01162,653,194 - 62,653,365NCBI
Rnor_5.01165,784,365 - 65,784,538NCBI
Rnor_5.01165,784,367 - 65,784,538UniSTS
RGSC_v3.41161,504,311 - 61,504,483RGD
RGSC_v3.11161,561,901 - 61,562,072RGD
Celera1159,335,665 - 59,335,836UniSTS
RH 3.4 Map11522.8RGD
RH 3.4 Map11522.8UniSTS
RH 2.0 Map101226.3RGD
SHRSP x BN Map1125.2199RGD
FHH x ACI Map1141.9299RGD

Flank 2 / 1 (D11Mgh1)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21182,566,553 - 82,566,702 (+)MAPPER
Rnor_6.01186,714,483 - 86,714,631NCBI
Rnor_5.01189,808,355 - 89,808,503UniSTS
RGSC_v3.41184,560,092 - 84,560,241RGD
RGSC_v3.41184,560,093 - 84,560,241UniSTS
RGSC_v3.11184,600,689 - 84,600,838RGD
Celera1181,343,623 - 81,343,771UniSTS
SHRSP x BN Map1138.1899UniSTS
SHRSP x BN Map1138.1899RGD
FHH x ACI Map1157.2499RGD
Cytogenetic Map11q23UniSTS

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_reproduction Good breeding performance. 1302502

Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-05-17 F344.OLETF-(D11Mgh4-D11Mgh1)/2Tj    F344.OLETF-(D11Mgh4-D11Mgh1)/2Tj    Name updated 68913 APPROVED
2012-05-17 F344.OLETF-(D11Mgh4-D11Mgh1)/2Tj    F344.OLETF-(D11Mgh4-D11Mgh1)/2Tj    Name updated 68913 APPROVED