Strain Report - Rat Genome Database

Name: F344.Cg-Lepr fa ( D8Rat54-D8Mgh17 )/Tj
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Strain Registration

General

Strain: F344.Cg-Lepr^fa(D8Rat54-D8Mgh17)/Tj

Symbol:

F344.Cg-Lepr^fa(D8Rat54-D8Mgh17)/Tj

Strain:

F344.Cg-Lepr^fa(D8Rat54-D8Mgh17)

Substrain:

RGD ID:

2305998

Citation ID:

RRID:RGD_2305998

Ontology ID:

RS:0001929

Also Known As:

F344.Cg-Leprfa(D8Rat54-D8Mgh17)/Tj; F.Cg-leprZFNidd3OF/2Tj; F.O/ZF-leprZF; Nidd3/ofNS; NBRP Rat No: 0420; F344.Cg-Leprfa(D8Rat54-D8Mgh17)/Tj; F344.Cg-Lepr^[fa](D8Rat54-D8Mgh17)/Tj

Type:

congenic

Available Source:

National BioResource Project for the Rat in Japan

Origination:

National BioResource Project for the Rat in Japan

Description:

Developed by the DEPOSITOR

Coat Color:

Albino

Inbred Generations:

Last Known Status:

Cryopreserved Embryo

Research Usage

Diabetes Obesity

Position

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	8	69,349,194 - 69,349,344	RGD_MAPPER_PIPELINE	mRatBN7.2
Rnor_6.0	8	74,917,593 - 80,840,067	RGD_MAPPER_PIPELINE	Rnor6.0
Rnor_5.0	8	21,850,030 - 79,245,063	RGD_MAPPER_PIPELINE	Rnor5.0
RGSC_v3.4	8	19,796,514 - 73,102,155	RGD_MAPPER_PIPELINE	RGSC3.4

Annotation Click to see Annotation Detail View

References

References - curated

#	Reference Title	Reference Citation
1.	Strains registered by the National Bio Resource Project for the Rat in Japan	Personal Communication with NBRP
2.	RGD Strain RSO annotation pipeline	RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D8Rat54)

Rat Assembly	Chr	Position (strand)	Source
Rnor_5.0	8	21,850,030 - 21,850,200	NCBI
RGSC_v3.4	8	19,796,514 - 19,796,683	RGD
RGSC_v3.1	8	19,796,514 - 19,796,683	RGD
RH 3.4 Map	8	181.0	UniSTS
RH 3.4 Map	8	181.0	RGD
SHRSP x BN Map	8	14.26	UniSTS
SHRSP x BN Map	8	14.26	RGD

Flank 2 / 1 (D8Mgh17)

Rat Assembly	Chr	Position (strand)	Source
mRatBN7.2	8	69,349,194 - 69,349,344 (+)	MAPPER
mRatBN7.2	8	69,349,194 - 69,349,344 (-)	MAPPER
Rnor_6.0	8	74,917,593 - 74,917,742	NCBI
Rnor_6.0	8	80,839,918 - 80,840,067	NCBI
Rnor_5.0	8	79,244,914 - 79,245,063	UniSTS
Rnor_5.0	8	76,889,142 - 76,889,291	UniSTS
RGSC_v3.4	8	73,102,006 - 73,102,155	UniSTS
RGSC_v3.4	8	73,102,005 - 73,102,155	RGD
RGSC_v3.1	8	73,121,059 - 73,121,209	RGD
Celera	8	72,371,421 - 72,371,570	UniSTS
Cytogenetic Map	8	q24	UniSTS

Additional Information

RGD Curation Notes

Note Type	Note	Reference
strain_reproduction	Poor breeding performance.	1302502

Nomenclature History

Date	Current Symbol	Current Name	Previous Symbol	Previous Name	Description	Reference	Status
2012-05-17	F344.Cg-Lepr^fa(D8Rat54-D8Mgh17)/Tj		F344.Cg-Lepr^fa(D8Rat54-D8Mgh17)/Tj		Name updated	68913	APPROVED
2012-05-17	F344.Cg-Lepr^fa(D8Rat54-D8Mgh17)/Tj		F344.Cg-Lepr^fa(D8Rat54-D8Mgh17)/Tj		Name updated	68913	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Strain: F344.Cg-Leprfa(D8Rat54-D8Mgh17)/Tj

Strain: F344.Cg-Lepr^fa(D8Rat54-D8Mgh17)/Tj