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Strain Registration

Strain: SHR.SHRSP-(D18Rat73-D18Rat11)/Izm

Symbol: SHR.SHRSP-(D18Rat73-D18Rat11)/Izm
Strain: SHR.SHRSP-(D18Rat73-D18Rat11)
Substrain: Izm
RGD ID: 2305967
Citation ID: RRID:RGD_2305967
Ontology ID: RS:0002159
Also Known As: SHR.SHRSP-(D18Rat73-D18Rat11)/Izm; SHRpch18.0; NBRP Rat No: 0400; SHR.SHRSP-(D18Rat73-D18Rat11)/Izm
Type: congenic
Available Source: National BioResource Project for the Rat in Japan, Department of Functional Pathology, Shimane University Faculty of Medicine, Izumo, Japan.
Origination: National BioResource Project for the Rat in Japan, Department of Functional Pathology, Shimane University Faculty of Medicine, Izumo, Japan.
Description: Developed by the DEPOSITOR
Last Known Status: Cryopreserved Sperm
Research Usage Diabetes Obesity
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21849,999,958 - 68,414,117RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01851,609,032 - 70,803,264RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01850,804,228 - 69,942,605RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41852,290,789 - 71,692,408RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
# Reference Title Reference Citation
1. Two genomic regions of chromosomes 1 and 18 explain most of the stroke susceptibility under salt loading in stroke-prone spontaneously hypertensive rat/Izm. Gandolgor TA, etal., Hypertension. 2013 Jul;62(1):55-61. doi: 10.1161/HYPERTENSIONAHA.111.00488. Epub 2013 May 20.
2. Strains registered by the National Bio Resource Project for the Rat in Japan Personal Communication with NBRP
3. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D18Rat73)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21849,999,958 - 50,000,167 (+)MAPPER
Rnor_6.01851,609,032 - 51,609,240NCBI
Rnor_5.01850,804,228 - 50,804,436UniSTS
RGSC_v3.41852,290,789 - 52,291,194RGD
RGSC_v3.41852,290,924 - 52,291,132UniSTS
RGSC_v3.11852,336,284 - 52,336,689RGD
Celera1848,145,282 - 48,145,490UniSTS
SHRSP x BN Map1819.1999RGD
SHRSP x BN Map1819.1999UniSTS

Flank 2 / 1 (D18Rat11)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21868,413,983 - 68,414,117 (+)MAPPER
Rnor_6.01870,803,131 - 70,803,264NCBI
Rnor_5.01869,942,468 - 69,942,605UniSTS
RGSC_v3.41871,692,275 - 71,692,408UniSTS
RGSC_v3.41871,692,274 - 71,692,408RGD
RGSC_v3.11871,765,476 - 71,765,609RGD
Celera1866,590,295 - 66,590,428UniSTS
RH 3.4 Map18698.1RGD
RH 3.4 Map18698.1UniSTS
RH 2.0 Map18211.5RGD
FHH x ACI Map1847.4699RGD

Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-11-19 SHR.SHRSP-(D18Rat73-D18Rat11)/Izm    SHR.SHRSP-(D18Rat73-D18Rat11)/Izm    Name updated 68913 APPROVED
2013-11-19 SHR.SHRSP-(D18Rat73-D18Rat11)/Izm    SHR.SHRSP-(D18Rat73-D18Rat11)/Izm    Name updated 68913 APPROVED
2012-05-16 SHR.SHRSP-(D18Rat73-D18Rat11)/Izm    SHR.SHRSP-(D18Rat73-D18Rat11)/Izm    Name updated 68913 APPROVED
2012-05-16 SHR.SHRSP-(D18Rat73-D18Rat11)/Izm    SHR.SHRSP-(D18Rat73-D18Rat11)/Izm    Name updated 68913 APPROVED