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Strain Registration

Strain: SHR.SHRSP-(D1Rat93-D1Rat269)/Izm

Symbol: SHR.SHRSP-(D1Rat93-D1Rat269)/Izm
Strain: SHR.SHRSP-(D1Rat93-D1Rat269)
Substrain: Izm
RGD ID: 2305966
Citation ID: RRID:RGD_2305966
Ontology ID: RS:0002160
Also Known As: SHR.SHRSP-(D1Rat93-D1Rat269)/Izm; SHRpch1.0; NBRP Rat No: 0398; SHR.SHRSP-(D1Rat93-D1Rat269)/Izm
Type: congenic
Available Source: National BioResource Project for the Rat in Japan, Department of Functional Pathology, Shimane University Faculty of Medicine, Izumo, Japan.
Origination: National BioResource Project for the Rat in Japan, Department of Functional Pathology, Shimane University Faculty of Medicine, Izumo, Japan.
Description: Developed by the DEPOSITOR
Last Known Status: Cryopreserved Sperm
Research Usage Diabetes Obesity
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2165,677,942 - 124,977,364RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0164,252,881 - 132,448,306RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0163,244,295 - 133,485,967RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4163,990,899 - 126,292,805RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
# Reference Title Reference Citation
1. Two genomic regions of chromosomes 1 and 18 explain most of the stroke susceptibility under salt loading in stroke-prone spontaneously hypertensive rat/Izm. Gandolgor TA, etal., Hypertension. 2013 Jul;62(1):55-61. doi: 10.1161/HYPERTENSIONAHA.111.00488. Epub 2013 May 20.
2. Strains registered by the National Bio Resource Project for the Rat in Japan Personal Communication with NBRP
3. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D1Rat93)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2165,677,942 - 65,678,123 (+)MAPPER
Rnor_6.0164,252,881 - 64,253,061NCBI
Rnor_5.0163,244,295 - 63,244,475UniSTS
RGSC_v3.4163,990,899 - 63,991,255RGD
RGSC_v3.4163,990,910 - 63,991,090UniSTS
RGSC_v3.1164,067,649 - 64,067,829RGD
Celera163,401,914 - 63,402,094UniSTS
RH 3.4 Map1740.2RGD
RH 3.4 Map1740.2UniSTS
RH 2.0 Map1460.8RGD
FHH x ACI Map133.7599RGD
Cytogenetic Map1q12UniSTS

Flank 2 / 1 (D1Rat269)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21124,977,174 - 124,977,364 (+)MAPPER
Rnor_6.01132,448,117 - 132,448,306NCBI
Rnor_5.01133,485,778 - 133,485,967UniSTS
RGSC_v3.41126,292,616 - 126,292,805UniSTS
RGSC_v3.41126,292,615 - 126,292,805RGD
RGSC_v3.11126,370,959 - 126,371,148RGD
Celera1117,133,184 - 117,133,371UniSTS
RH 3.4 Map1979.2RGD
RH 3.4 Map1979.2UniSTS
RH 2.0 Map1663.9RGD
SHRSP x BN Map160.8499RGD

Additional Information


Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2013-11-19 SHR.SHRSP-(D1Rat93-D1Rat269)/Izm    SHR.SHRSP-(D1Rat93-D1Rat269)/Izm    Name updated 68913 APPROVED
2013-11-19 SHR.SHRSP-(D1Rat93-D1Rat269)/Izm    SHR.SHRSP-(D1Rat93-D1Rat269)/Izm    Name updated 68913 APPROVED
2012-05-16 SHR.SHRSP-(D1Rat93-D1Rat269)/Izm    SHR.SHRSP-(D1Rat93-D1Rat269)/Izm    Name updated 68913 APPROVED
2012-05-16 SHR.SHRSP-(D1Rat93-D1Rat269)/Izm    SHR.SHRSP-(D1Rat93-D1Rat269)/Izm    Name updated 68913 APPROVED