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Strain Registration

Strain: SHRSP.WKY-(Calca-D1Arb21)/IzmTkyo

Symbol: SHRSP.WKY-(Calca-D1Arb21)/IzmTkyo
Strain: SHRSP.WKY-(Calca-D1Arb21)
Substrain: IzmTkyo
RGD ID: 2304315
Citation ID: RRID:RGD_2304315
Ontology ID: RS:0002519
Also Known As: SHRSP.WKY-(Calca-D1Arb21)/IzmTkyo; sub 8; NBRP Rat No: 0367; SHRSP.WKY-(Calca-D1Arb21)/IzmTkyo
Type: congenic
Available Source: National BioResource Project for the Rat in Japan
Origination: National BioResource Project for the Rat in Japan
Description: Developed by the DEPOSITOR
Coat Color: Albino
Inbred Generations: F15
Last Known Status: Cryopreserved Embryo
Research Usage Diabetes Obesity; Cardio Hypertension
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21168,878,212 - 182,418,476RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01184,184,018 - 199,254,774RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01191,158,061 - 206,277,202RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41172,686,168 - 187,092,492RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
# Reference Title Reference Citation
1. Strains registered by the National Bio Resource Project for the Rat in Japan Personal Communication with NBRP
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 2 / 1 (D1Arb21)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21182,418,219 - 182,418,476 (+)MAPPER
Rnor_6.01199,254,518 - 199,254,774NCBI
Rnor_5.01206,276,946 - 206,277,202UniSTS
RGSC_v3.41187,092,235 - 187,092,492RGD
RGSC_v3.41187,092,236 - 187,092,492UniSTS
RGSC_v3.11187,242,116 - 187,242,373RGD
Celera1180,069,264 - 180,069,520UniSTS
FHH x ACI Map185.51UniSTS
FHH x ACI Map185.51RGD
Cytogenetic Map1q36UniSTS

Flank 1 / 1 (Calca)
Rat AssemblyChrPosition (strand)Source
GRCr81178,312,636 - 178,317,588 (-)NCBI
mRatBN7.21168,878,212 - 168,883,176 (-)NCBI
mRatBN7.2 Ensembl1168,878,214 - 168,883,105 (-)Ensembl
UTH_Rnor_SHR_Utx1177,192,440 - 177,197,339 (-)NCBI
UTH_Rnor_SHRSP_BbbUtx_1.01184,378,496 - 184,383,399 (-)NCBI
UTH_Rnor_WKY_Bbb_1.01177,090,892 - 177,095,773 (-)NCBI
Rnor_6.01184,184,018 - 184,188,922 (-)NCBI
Rnor_6.0 Ensembl1184,184,020 - 184,188,911 (-)Ensembl
Rnor_5.01191,158,061 - 191,162,954 (-)NCBI
RGSC_v3.41172,686,168 - 172,691,061 (-)NCBI
RGSC_v3.11172,824,299 - 172,827,127 (-)NCBI
Celera1166,711,610 - 166,716,491 (-)NCBI
RH 3.4 Map11317.6RGD
RH 2.0 Map1757.3RGD
Cytogenetic Map1q34NCBI

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_reproduction Maintained in homozygous condition. Sib mating. 1302502

Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-05-16 SHRSP.WKY-(Calca-D1Arb21)/IzmTkyo    SHRSP.WKY-(Calca-D1Arb21)/IzmTkyo    Name updated 68913 APPROVED
2012-05-16 SHRSP.WKY-(Calca-D1Arb21)/IzmTkyo    SHRSP.WKY-(Calca-D1Arb21)/IzmTkyo    Name updated 68913 APPROVED