Strain Report - Rat Genome Database

Send us a Message



 Submit Data |  Help |  Video Tutorials |  News |  Publications |  Download |  REST API |  Citing RGD |  Contact   
Search RGD Grant Resources Citing RGD About Us Contact Us
Genes QTLs Strains Markers Genome Information Ontologies Cell Lines References Download Submit Data
OntoMate (Literature Search) JBrowse (Genome Browser) Synteny Browser (VCMap)  (beta) Variant Visualizer Multi-Ontology Enrichment (MOET) Gene-Ortholog Location Finder (GOLF) InterViewer (Protein-Protein Interactions) PhenoMiner (Quatitative Phenotypes) Gene Annotator OLGA (Gene List Generator) AllianceMine GViewer (Genome Viewer) Overgo Probe Designer
Aging & Age-Related Disease Cancer & Neoplastic Disease Cardiovascular Disease COVID-19 Developmental Disease Diabetes Hematologic Disease Immune & Inflammatory Disease Infectious Disease Liver Disease Neurological Disease Obesity & Metabolic Syndrome Renal Disease Respiratory Disease Sensory Organ Disease
Find Models   new Genetic Models Autism Models PhenoMiner (Quantitative Phenotypes) Expected Ranges (Quantitative Phenotype) PhenoMiner Term Comparison Hybrid Rat Diversity Panel Phenotypes GERRC (Gene Editing Rat Resource Center) Phenotypes in Other Animal Models Animal Husbandry Strain Medical Records Phylogenetics Strain Availability Calendar Rats 101 Submissions Photo Archive
Pathways
Rat Community Forum Directory of Rat Laboratories Video Tutorials News RGD Publications RGD Poster Archive Nomenclature Guidelines Resource Links Laboratory Resources Employment Resources
Strain Registration

Strain: F344.OLETF-(D14Rat23-D14Rat55)/Tj

Symbol: F344.OLETF-(D14Rat23-D14Rat55)/Tj
Strain: F344.OLETF-(D14Rat23-D14Rat55)
Substrain: Tj
RGD ID: 2304050
Citation ID: RRID:RGD_2304050
Ontology ID: RS:0001948
Previously known as: F344.OLETF-(D14Rat23-D14Rat55)/Tj; F.O-Nidd2/of.rat55; F.O-Nidd2/of.rat55; NBRP Rat No: 0184; F344.OLETF-(D14Rat23-D14Rat55)/Tj
Type: congenic
Source: National BioResource Project for the Rat in Japan
Origin: Established as speed congenics (5 generations, microsatellite marker) at the University of Tokushima School of Medicine, Institute for Animal Experimentation in 1998. Afterwards, maintained by sib mating.
Inbred Generations: F1
Last Known Status: Cryopreserved Embryo
Research Usage Diabetes Obesity
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2141,217,606 - 25,656,577RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0142,227,825 - 27,686,562RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0142,222,207 - 27,510,976RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4141,764,386 - 27,571,792RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
# Reference Title Reference Citation
1. Strains registered by the National Bio Resource Project for the Rat in Japan Personal Communication with NBRP
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D14Rat23)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2141,217,606 - 1,217,776 (+)MAPPER
Rnor_6.0142,227,825 - 2,227,992NCBI
Rnor_5.0142,222,207 - 2,222,374UniSTS
RGSC_v3.4141,764,386 - 1,764,554RGD
RGSC_v3.4141,764,387 - 1,764,554UniSTS
RGSC_v3.1141,764,386 - 1,764,554RGD
Celera141,256,962 - 1,257,129UniSTS
RH 2.0 Map140.0RGD
FHH x ACI Map141.33RGD

Flank 2 / 1 (D14Rat55)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21425,656,356 - 25,656,577 (+)MAPPER
Rnor_6.01427,686,342 - 27,686,562NCBI
Rnor_5.01427,510,756 - 27,510,976UniSTS
RGSC_v3.41427,571,487 - 27,571,792RGD
RGSC_v3.41427,571,503 - 27,571,723UniSTS
RGSC_v3.11427,571,503 - 27,571,723RGD
Celera1425,024,431 - 25,024,659UniSTS
RH 3.4 Map14318.7UniSTS
RH 3.4 Map14318.7RGD
RH 2.0 Map14302.1RGD
SHRSP x BN Map1415.94RGD
FHH x ACI Map1426.22RGD

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_reproduction Good breeding performance. 1302502

Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-05-10 F344.OLETF-(D14Rat23-D14Rat55)/Tj    F344.OLETF-(D14Rat23-D14Rat55)/Tj    Name updated 68913 APPROVED