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Strain Registration

Strain: SS.BN-(D13Got51-D13Rat57)/Mcwi

Symbol: SS.BN-(D13Got51-D13Rat57)/Mcwi
Strain: SS.BN-(D13Got51-D13Rat57)
Substrain: Mcwi
RGD ID: 2303011
Citation ID: RRID:RGD_2303011
Ontology ID: RS:0001730
Also Known As: SS.BN-(D13Got45-D13Rat197)/Mcwi;congenic line 21;congenic strain 21; SS.BN-(D13Got51-D13Rat57)/Mcwi;SS.BN-(D13Got45-D13Rat197)/Mcwi; SS.BN-(D13Got51-D13Rat57)/Mcwi
Type: congenic
Available Source: Not Available
Origination: Medical College of Wisconsin, Milwaukee, Wisconsin
Description: SS/JrHsdMcwi were crossed with SS-13BN/Mcwi, rats from F1 were intercrossed and genotyped to get the congenic strain
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21366,706,825 - 66,707,096RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01372,031,440 - 72,031,708RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01376,974,692 - 87,516,988RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41369,494,047 - 80,109,632RGD_MAPPER_PIPELINERGSC3.4





Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

Phenotype Values via PhenoMiner     Click to see Annotation Detail View
Options:  View chart  |  Download data table  |  View expanded data table


References

References - curated
# Reference Title Reference Citation
1. Multiple Blood Pressure loci on rat Chromosome 13 attenuate the development of hypertension in the Dahl S Hypertensive rat. Moreno C, etal., Physiol Genomics. 2007 Jun 12;.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D13Got45)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21366,706,825 - 66,707,096 (+)MAPPER
Rnor_6.01372,031,440 - 72,031,708NCBI
Rnor_5.01376,974,692 - 76,974,960UniSTS
RGSC_v3.41369,494,047 - 69,494,326RGD
RGSC_v3.41369,494,047 - 69,494,315UniSTS
RGSC_v3.11369,508,127 - 69,508,395RGD
Celera1366,584,506 - 66,584,761UniSTS
RH 3.4 Map13341.9RGD
RH 3.4 Map13341.9UniSTS
Cytogenetic Map13q21UniSTS

Flank 2 / 1 (D13Rat197)
Rat AssemblyChrPosition (strand)Source
Rnor_5.01387,516,787 - 87,516,988NCBI
RGSC_v3.41380,109,432 - 80,109,632RGD
RGSC_v3.11380,123,620 - 80,123,820RGD
SHRSP x BN Map1338.4998RGD
SHRSP x BN Map1338.4998UniSTS

Additional Information