Strain Report - Rat Genome Database

Name: F344- Bbx Tn(sb-T2/Bart3)2.291Mcwi
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

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Strain Registration

General

Strain: F344-Bbx^{Tn(sb-T2/Bart3)2.291Mcwi}

Symbol:

F344-Bbx^{Tn(sb-T2/Bart3)2.291Mcwi}

Strain:

F344-Bbx^{Tn(sb-T2/Bart3)2.291}

Substrain:

Mcwi

RGD ID:

2302658

Citation ID:

RRID:RRRC_00428

Ontology ID:

RS:0001702

Alleles:

Bbx^{Tn(sb-T2/Bart3)2.291Mcwi}

Previously known as:

F344-BbxTn(sb-T2/Bart3)2.291Mcwi

Type:

mutant

Source:

PhysGen, Transposagen, Rat Resource & Research Center

Origin:

These Sleeping Beauty mutants were derived by crossing F344-TgTn(T2/Bart3)2Ceb (RGD:2290163) and F344-Tg(PGK2-sb11)Ceb (RGD:2290169). This mutation consists of an insertion of a Sleeping Beauty transposable element gene trap construct into the 1st intron of the Bbx gene.

Last Known Status:

Cryopreserved Sperm (as of 2017-01-26)

Position

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	11	50,381,249 - 50,628,934	RGD_MAPPER_PIPELINE	mRatBN7.2
Rnor_6.0	11	52,983,286 - 53,228,557	RGD_MAPPER_PIPELINE	Rnor6.0
Rnor_5.0	11	56,153,038 - 56,397,255	RGD_MAPPER_PIPELINE	Rnor5.0
RGSC_v3.4	11	51,655,446 - 51,799,132	RGD_MAPPER_PIPELINE	RGSC3.4

Annotation Click to see Annotation Detail View

References

References - curated

#	Reference Title	Reference Citation
1.	Generation of rat mutants using a coat color-tagged Sleeping Beauty transposon system.	Lu B, etal., Mamm Genome. 2007 May;18(5):338-46. Epub 2007 Jun 8.
2.	Data registered by the Rat Resource & Research Center	Personal Communication with Rat Resource & Research Center
3.	PhysGen Strains	PhysGen strains
4.	RGD Strain RSO annotation pipeline	RGD Automated Pipelines

Region

Additional Information

Nomenclature History

Date	Current Symbol	Previous Symbol	Description	Reference	Status
2014-03-25	F344-Bbx^{Tn(sb-T2/Bart3)2.291Mcwi}	F344-Bbx^{Tn(sb-T2/Bart3)2.291Mcwi}	Symbol updated	68687	APPROVED
2014-03-25	F344-Bbx^{Tn(sb-T2/Bart3)2.291Mcwi}	F344-Bbx^{Tn(sb-T2/Bart3)2.291Mcwi}	Name updated	68913	APPROVED
2014-03-25	F344-Bbx^{Tn(sb-T2/Bart3)2.291Mcwi}	F344-Bbx^{Tn(sb-T2/Bart3)2.291Mcwi}	Symbol updated	68687	APPROVED
2014-03-25	F344-Bbx^{Tn(sb-T2/Bart3)2.291Mcwi}	F344-Bbx^{Tn(sb-T2/Bart3)2.291Mcwi}	Name updated	68913	APPROVED
2012-04-06	F344-Bbx^{Tn(sb-T2/Bart3)2.291Mcwi}	F344-Bbx^{Tn(sb-T2/Bart3)2.291Mcwi}	Name updated	68913	APPROVED
2012-04-06	F344-Bbx^{Tn(sb-T2/Bart3)2.291Mcwi}	F344-Bbx^{Tn(sb-T2/Bart3)2.291Mcwi}	Name updated	68913	APPROVED
2010-06-08	F344-Bbx^{Tn(sb-T2/Bart3)2.291Mcwi}	F344-Bbx^{Tn(sb-T2/Bart3)2.291}/Mcwi	Symbol updated	68687	APPROVED
2010-06-08	F344-Bbx^{Tn(sb-T2/Bart3)2.291Mcwi}	F344-Bbx^{Tn(sb-T2/Bart3)2.291}/Mcwi	Name updated	68913	APPROVED
2010-06-08	F344-Bbx^{Tn(sb-T2/Bart3)2.291Mcwi}	F344-Bbx^{Tn(sb-T2/Bart3)2.291}/Mcwi	Symbol updated	68687	APPROVED
2010-06-08	F344-Bbx^{Tn(sb-T2/Bart3)2.291Mcwi}	F344-Bbx^{Tn(sb-T2/Bart3)2.291}/Mcwi	Name updated	68913	APPROVED

External Database Links

Database	Acc Id	Source(s)
RRRC	RRRC:00428	RGD

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Strain: F344-BbxTn(sb-T2/Bart3)2.291Mcwi

Strain: F344-Bbx^{Tn(sb-T2/Bart3)2.291Mcwi}