Strain Report - Rat Genome Database

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Strain: ACI.COP-(D10Mgh20-D10Rat4)/Shul

Symbol: ACI.COP-(D10Mgh20-D10Rat4)/Shul
Strain: ACI.COP-(D10Mgh20-D10Rat4)
Substrain: Shul
RGD ID: 2292567
Citation ID: RRID:RGD_2292567
Ontology ID: RS:0001158
Previously known as: ACI.COP-Ept9; ACI.COP-Ept9; Ept9; ACI.COP-(D10Mgh8-D10Rat4)/Shul; ACI.COP-(D10Mgh20-D10Rat4)/Shul
Type: congenic
Source: Department of Genetics, Cell Biology and Anatomy, University Of Nebraska Medical Center, Omaha, Nebraska
Origin: Female COP/CrCrl and male ACI/SegHsd were crossed to get F1 progeny which were in turn backcrossed with female ACI/SegHsd; the offsprings were genotyped
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.210102,134,116 - 102,134,272RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.010105,875,105 - 105,875,260RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01053,376,677 - 105,533,612RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41053,781,126 - 107,033,716RGD_MAPPER_PIPELINERGSC3.4





Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

Phenotype Values via PhenoMiner     Click to see Annotation Detail View
Options:  View chart  |  Download data table  |  View expanded data table

Clinical Measurement
mammary tumor number

References

References - curated
# Reference Title Reference Citation
1. Tissue-Specific Actions of the Ept1, Ept2, Ept6, and Ept9 Genetic Determinants of Responsiveness to Estrogens in the Female Rat. Kurz SG, etal., Endocrinology. 2008 Apr 17;.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D10Mgh8)
Rat AssemblyChrPosition (strand)Source
Rnor_5.01053,376,677 - 53,376,848UniSTS
RGSC_v3.41053,781,126 - 53,781,298RGD
RGSC_v3.41053,781,127 - 53,781,298UniSTS
RGSC_v3.11053,794,749 - 53,794,921RGD
Celera1050,957,549 - 50,957,720UniSTS
SHRSP x BN Map1044.1899UniSTS
SHRSP x BN Map1044.1899RGD
Cytogenetic Map10q24UniSTS

Flank 2 / 1 (D10Rat4)
Rat AssemblyChrPosition (strand)Source
mRatBN7.210102,134,116 - 102,134,272 (+)MAPPER
Rnor_6.010105,875,105 - 105,875,260NCBI
Rnor_5.010105,533,457 - 105,533,612UniSTS
RGSC_v3.410107,033,560 - 107,033,716RGD
RGSC_v3.410107,033,561 - 107,033,716UniSTS
RGSC_v3.110107,048,064 - 107,048,220RGD
Celera10100,702,311 - 100,702,466UniSTS
SHRSP x BN Map1095.4399RGD
SHRSP x BN Map1095.4399UniSTS
Cytogenetic Map10q32.3UniSTS
Strain QTL Data
Symbol Name Trait
Ept18 Estrogen-induced pituitary tumorigenesis QTL 18 pituitary gland mass   (VT:0010496)    

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_other COP allele inhibited the induction of pituitary growth by E2 at 12 weeks but not observed at 28 weeks 2292503

Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2014-11-07 ACI.COP-(D10Mgh20-D10Rat4)/Shul    ACI.COP-(D10Mgh20-D10Rat4)/Shul    Name updated 68913 APPROVED
2014-11-07 ACI.COP-(D10Mgh20-D10Rat4)/Shul    ACI.COP-(D10Mgh20-D10Rat4)/Shul    Name updated 68913 APPROVED
2013-07-08 ACI.COP-(D10Mgh20-D10Rat4)/Shul    ACI.COP-(D10Mgh8-D10Rat4)/Shul    Name updated 68913 APPROVED
2013-07-08 ACI.COP-(D10Mgh20-D10Rat4)/Shul    ACI.COP-(D10Mgh8-D10Rat4)/Shul    Name updated 68913 APPROVED
2013-07-08 ACI.COP-(D10Mgh20-D10Rat4)/Shul    ACI.COP-(D10Mgh8-D10Rat4)/Shul    Symbol updated 68687 APPROVED
2013-07-08 ACI.COP-(D10Mgh20-D10Rat4)/Shul    ACI.COP-(D10Mgh8-D10Rat4)/Shul    Symbol updated 68687 APPROVED