Strain Report - Rat Genome Database

Name: F344- Cyss Tn(sb-T2/Bart3)2.173Mcwi
Creator: Rat Genome Database
License: Creative Commons CC BY 4.0
Keywords: Rat Gene RGD Genome

Strain Registration

General

Strain: F344-Cyss^{Tn(sb-T2/Bart3)2.173Mcwi}

Symbol:

F344-Cyss^{Tn(sb-T2/Bart3)2.173Mcwi}

Strain:

F344-Cyss^{Tn(sb-T2/Bart3)2.173}

Substrain:

Mcwi

RGD ID:

2290107

Citation ID:

RRID:RGD_2290107

Ontology ID:

RS:0001254

Alleles:

Cyss^{Tn(sb-T2/Bart3)2.173Mcwi}

Also Known As:

F344-CyssTn(sb-T2/Bart3)2.173Mcwi; F344-Cyss^{Tn(sb-T2/Bart3)2.173Mcwi}; F344-Cyss^{Tn(sb-T2/Bart3)2.173Mcwi}......; F344-Cyss^{Tn(sb-T2/Bart3)2.173Mcwi}...; F344-Cyss^[Tn(sb-T2/Bart3)2.173Mcwi]

Type:

mutant

Available Source:

Not Available

Origination:

PGA

Description:

These Sleeping Beauty mutants were derived by crossing F344-TgTn(T2/Bart3)2Ceb (RGD:2290163) and F344-Tg(PGK2-sb11)Ceb (RGD:2290169). This mutation consists of an insertion of a Sleeping Beauty transposable element gene trap construct into the 1^st intron of the Cyss gene.

Last Known Status:

Unknown

Position

Rat Assembly	Chr	Position (strand)	Source	JBrowse
mRatBN7.2	3	137,432,049 - 137,436,654	RGD_MAPPER_PIPELINE	mRatBN7.2
Rnor_6.0	3	144,427,430 - 144,431,768	RGD_MAPPER_PIPELINE	Rnor6.0
Rnor_5.0	3	150,801,395 - 150,805,733	RGD_MAPPER_PIPELINE	Rnor5.0
RGSC_v3.4	3	138,826,625 - 138,830,963	RGD_MAPPER_PIPELINE	RGSC3.4

Annotation Click to see Annotation Detail View

References

References - curated

#	Reference Title	Reference Citation
1.	Generation of rat mutants using a coat color-tagged Sleeping Beauty transposon system.	Lu B, etal., Mamm Genome. 2007 May;18(5):338-46. Epub 2007 Jun 8.
2.	PhysGen Strains	PhysGen strains
3.	RGD Strain RSO annotation pipeline	RGD Automated Pipelines

Region

Additional Information

Nomenclature History

Date	Current Symbol	Previous Symbol	Description	Reference	Status
2023-12-08	F344-Cyss^{Tn(sb-T2/Bart3)2.173Mcwi}	F344-Cyss^{Tn(sb-T2/Bart3)2.173Mcwi}...	Symbol and/or name change	68913	APPROVED
2023-12-08	F344-Cyss^{Tn(sb-T2/Bart3)2.173Mcwi}...	F344-Cyss^{Tn(sb-T2/Bart3)2.173Mcwi}	Symbol and/or name change	68913	APPROVED
2023-12-08	F344-Cyss^{Tn(sb-T2/Bart3)2.173Mcwi}	F344-Cyss^{Tn(sb-T2/Bart3)2.173Mcwi}......	Symbol and/or name change	68913	APPROVED
2023-12-08	F344-Cyss^{Tn(sb-T2/Bart3)2.173Mcwi}......	F344-Cyss^{Tn(sb-T2/Bart3)2.173Mcwi}	Symbol and/or name change	68913	APPROVED
2014-03-24	F344-Cyss^{Tn(sb-T2/Bart3)2.173Mcwi}	F344-Cyss^{Tn(sb-T2/Bart3)2.173Mcwi}	Name updated	68913	APPROVED
2014-03-24	F344-Cyss^{Tn(sb-T2/Bart3)2.173Mcwi}	F344-Cyss^{Tn(sb-T2/Bart3)2.173Mcwi}	Symbol updated	68687	APPROVED
2014-03-24	F344-Cyss^{Tn(sb-T2/Bart3)2.173Mcwi}	F344-Cyss^{Tn(sb-T2/Bart3)2.173Mcwi}	Name updated	68913	APPROVED
2014-03-24	F344-Cyss^{Tn(sb-T2/Bart3)2.173Mcwi}	F344-Cyss^{Tn(sb-T2/Bart3)2.173Mcwi}	Symbol updated	68687	APPROVED

Gene Annotator (Functional Annotation) unavailable	Gene Annotator (Annotation Distribution) unavailable	Variant Visualizer (Genomic Variants) unavailble Variant Visualizer (Genomic Variants) unavailable
Gene Annotator (Functional Annotation)	Gene Annotator (Annotation Distribution)	Variant Visualizer (Genomic Variants)

InterViewer (Protein-Protein Interactions) unavailable	Gviewer (Genome Viewer) unavailable	Variant Visualizer (Damaging Variants) unavailble Variant Visualizer (Damaging Variants) unavailable
InterViewer (Protein-Protein Interactions)	GViewer (Genome Viewer)	Variant Visualizer (Damaging Variants)

Gene Annotator (Annotation Comparison) unavailable	OLGA (Gene List Generator) unavailable
Gene Annotator (Annotation Comparison)	OLGA (Gene List Generator)	Excel (Download)

MOET (Multi-Ontology Enrichement) unavailable	GOLF (Gene-Ortholog Location Finder) unavailable
MOET (Multi-Ontology Enrichement)	GOLF (Gene-Ortholog Location Finder)

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Strain: F344-CyssTn(sb-T2/Bart3)2.173Mcwi

Strain: F344-Cyss^{Tn(sb-T2/Bart3)2.173Mcwi}