Strain Report - Rat Genome Database

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Strain: SPRD.WKY-(D18Wox8-D18Rat44)/Ibmm

Symbol: SPRD.WKY-(D18Wox8-D18Rat44)/Ibmm
Strain: SPRD.WKY-(D18Wox8-D18Rat44)
Substrain: Ibmm
RGD ID: 1599760
Citation ID: RRID:RGD_1599760
Ontology ID: RS:0001450
Previously known as: SPRD.WKY-(D18Rat102-D18Rat44)/Ibmm; SPRD-Cu3.WKY-D18Rat102/D18Rat44; SPRD-Cu3.WKY-Mcstm2; SPRD.WKY-(D18Wox8-D18Rat44)/Ibmm;C18.Mcstm2; SPRD.WKY-(D18Wox8-D18Rat44)/Ibmm
Type: congenic
Source: Universite Libre de Bruxelles, Institut de Biologie et de Medecine Moleculaires, Gosselies, Belgium
Origin: SPRD/HanZtm were crossed with WKY/Han and F1 males were backcrossed with SPRD/HanZtm. Heterozygous carriers were bred to SPRD/HanZtm.
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21819,278,901 - 83,218,561RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01820,285,758 - 87,080,053RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01820,030,289 - 86,114,102RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41819,892,650 - 86,863,412RGD_MAPPER_PIPELINERGSC3.4





Disease Annotations     Click to see Annotation Detail View

Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

References

References - curated
# Reference Title Reference Citation
1. Mammary cancer resistance and precocious mammary differentiation in the WKY rat: identification of 2 quantitative trait loci. Lella V, etal., Int J Cancer. 2007 Oct 15;121(8):1738-43.
2. Contrasting epistatic interactions between rat quantitative trait loci controlling mammary cancer development. Piessevaux G, etal., Mamm Genome. 2008 Dec 4.
3. RGD Strain RSO annotation pipeline RGD Automated Pipelines
4. Isolation of two regions on rat chromosomes 5 and 18 affecting mammary cancer susceptibility. Stieber D, etal., Int J Cancer. 2007 Jan 17;.

Region

Position Markers

Flank 1 / 1 (D18Rat102)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21819,278,901 - 19,279,072 (+)MAPPER
Rnor_6.01820,285,758 - 20,285,928NCBI
Rnor_5.01820,030,289 - 20,030,459UniSTS
RGSC_v3.41819,892,650 - 19,892,822RGD
RGSC_v3.41819,892,651 - 19,892,821UniSTS
RGSC_v3.11819,919,296 - 19,919,468RGD
Celera1819,143,625 - 19,143,795UniSTS
SHRSP x BN Map1811.5799RGD
SHRSP x BN Map1811.5799UniSTS

Flank 2 / 1 (D18Rat44)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21883,218,355 - 83,218,561 (+)MAPPER
Rnor_6.01887,079,848 - 87,080,053NCBI
Rnor_5.01886,113,897 - 86,114,102UniSTS
RGSC_v3.41886,863,206 - 86,863,411RGD
RGSC_v3.41886,863,207 - 86,863,412UniSTS
RGSC_v3.11886,936,656 - 86,936,861RGD
Celera1881,767,822 - 81,768,025UniSTS
RH 3.4 Map18832.2UniSTS
RH 3.4 Map18832.2RGD
RH 2.0 Map180.0RGD
SHRSP x BN Map1852.3799RGD
FHH x ACI Map1865.7599RGD
Strain QTL Data
Symbol Name Trait
Mamtr6 Mammary tumor resistance QTL 6 mammary gland integrity trait   (VT:0010552)    
Mamtr8 Mammary tumor resistance QTL 8 mammary gland integrity trait   (VT:0010552)    

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_life_disease partially resisitant to chemically induced mammary cancinogenesis 1643011