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Strain Registration

Strain: WF.WKY-(D5Uwm66-D5Uwm67)/Uwm

Symbol: WF.WKY-(D5Uwm66-D5Uwm67)/Uwm
Strain: WF.WKY-(D5Uwm66-2-D5Uwm67)
Substrain: Uwm
RGD ID: 1581627
Citation ID: RRID:RGD_1581627
Ontology ID: RS:0001587
Also Known As: WF.WKY-(D5Uwm66-D5Uwm67)/Uwm; WF.WKy-bUwm26-2/bUwm36-1; congenic line T
Type: congenic
Available Source: Not Available
Origination: University of Wisconsin School of Medicine, Madison, Wisconsin
Description: A sub congenic strain derived from the progenitor strain WF.WKY-(D5Wox7-D5Uwm37).
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2569,927,283 - 76,370,048RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0571,940,894 - 78,777,811RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0576,105,513 - 82,897,734RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4573,080,117 - 79,919,776RGD_MAPPER_PIPELINERGSC3.4





Experimental Data Annotations    Click to see Annotation Detail View

Rat Strain
TermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
WF.WKY-(D5Uwm66-D5Uwm67)/Uwm  IEA 7241799 RGD 

Vertebrate Trait
TermQualifierEvidenceWithReferenceNotesSourceOriginal Reference(s)
mammary gland integrity trait  EXP 1559294 RGD 


References

References - curated
# Reference Title Reference Citation
1. RGD Strain RSO annotation pipeline RGD Automated Pipelines
2. Fine mapping reveals multiple loci and a possible epistatic interaction within the mammary carcinoma susceptibility quantitative trait locus, Mcs5. Samuelson DJ, etal., Cancer Res. 2005 Nov 1;65(21):9637-42.

Region

Position Markers

Flank 1 / 1 (D5Uwm66)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2569,927,283 - 69,927,503 (+)MAPPER
Rnor_6.0571,940,894 - 71,941,113NCBI
Rnor_5.0576,105,513 - 76,105,732UniSTS
RGSC_v3.4573,080,117 - 73,080,336UniSTS
Celera568,790,675 - 68,790,894UniSTS
Cytogenetic Map5 RGD

Flank 2 / 1 (D5Uwm67)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2576,369,776 - 76,370,048 (+)MAPPER
Rnor_6.0578,777,540 - 78,777,811NCBI
Rnor_5.0582,897,463 - 82,897,734UniSTS
RGSC_v3.4579,919,505 - 79,919,776UniSTS
Celera575,308,598 - 75,308,853UniSTS
Cytogenetic Map5 RGD
Strain QTL Data
Symbol Name Trait
Mcs13 Mammary carcinoma susceptibility QTL 13 mammary gland integrity trait   (VT:0010552)    

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_life_disease Averaged 9.7 mammary carcinomas per rat (WKY homozygous), which is not statistically different from WF-homozygous females. 1559294

Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2012-10-24 WF.WKY-(D5Uwm66-D5Uwm67)/Uwm    WF.WKY-(D5Uwm66-D5Uwm67)/Uwm    Name updated 68913 APPROVED
2012-10-24 WF.WKY-(D5Uwm66-D5Uwm67)/Uwm    WF.WKY-(D5Uwm66-D5Uwm67)/Uwm    Name updated 68913 APPROVED
2012-10-24 WF.WKY-(D5Uwm66-D5Uwm67)/Uwm    WF.WKY-(D5Uwm66-D5Uwm67)/Uwm    Name updated 68913 APPROVED
2012-10-23 WF.WKY-(D5Uwm66-D5Uwm67)/Uwm    WF.WKY-(D5Uwm66-D5Uwm67)/Uwm    Name updated 68913 APPROVED
2012-10-23 WF.WKY-(D5Uwm66-D5Uwm67)/Uwm    WF.WKY-(D5Uwm66-D5Uwm67)/Uwm    Name updated 68913 APPROVED