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Strain Registration

Strain: SS.LEW-(D10Chm224-D10Chm222)/Ayd

Symbol: SS.LEW-(D10Chm224-D10Chm222)/Ayd
Strain: SS.LEW-(D10Chm224-D10Chm222)
Substrain: Ayd
RGD ID: 1579913
Citation ID: RRID:RGD_1579913
Ontology ID: RS:0001515
Also Known As: C2S.L17; SS.LEW-(D10Chm224-D10Chm222)/Ayd
Type: congenic
Available Source: Not Available
Origination: Research Centre, Centre Hospitalier de l'Universite de Montreal (CHUM), Montreal, Quebec, Canada
Description: A sub congenic strain derived from the progenitor strain SS.LEW-(D10Wox51-D10Rat27)/Ayd.
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.21072,976,092 - 72,976,291RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.01075,505,821 - 75,506,019RGD_MAPPER_PIPELINERnor6.0
Rnor_5.01074,600,366 - 76,309,841RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.41074,705,355 - 76,477,875RGD_MAPPER_PIPELINERGSC3.4





Phenotype Annotations     Click to see Annotation Detail View

Mammalian Phenotype

Phenotype Values via PhenoMiner     Click to see Annotation Detail View
Options:  View chart  |  Download data table  |  View expanded data table

Clinical Measurement
mean arterial blood pressure

References

References - curated
# Reference Title Reference Citation
1. Epistasis, not numbers, regulates functions of clustered Dahl rat quantitative trait loci applicable to human hypertension. Charron S, etal., Hypertension. 2005 Dec;46(6):1300-8. Epub 2005 Nov 14.
2. Submegabase resolution of epistatically interacting quantitative trait loci for blood pressure applicable for essential hypertension. Chauvet C, etal., J Hypertens. 2008 May;26(5):893-901.
3. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D10Chm224)
Rat AssemblyChrPosition (strand)Source
Rnor_5.01076,309,595 - 76,309,841UniSTS
RGSC_v3.41074,705,355 - 74,705,601UniSTS
Celera1070,214,239 - 70,214,485UniSTS
Cytogenetic Map10q26UniSTS

Flank 2 / 1 (D10Chm222)
Rat AssemblyChrPosition (strand)Source
mRatBN7.21072,976,092 - 72,976,291 (+)MAPPER
Rnor_6.01075,505,821 - 75,506,019NCBI
Rnor_5.01074,600,366 - 74,600,564UniSTS
RGSC_v3.41076,477,677 - 76,477,875UniSTS
Celera1071,885,458 - 71,885,656UniSTS
Cytogenetic Map10q26UniSTS

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_phys_biochem Strain showed mean arterial pressure of 139 mmHg which was decreased from parental SS strain but the same as progenitor congenic strain SS.LEW-(D10Wox51-D10Rat27)/Ayd. 1559293