Strain Report - Rat Genome Database

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Strain: SS.SR-(D9Mco95-Resp18)/Mco

Symbol: SS.SR-(D9Mco95-Resp18)/Mco
Strain: SS.SR-(D9Mco95-Resp18)
Substrain: Mco
RGD ID: 1579908
Citation ID: RRID:RGD_1579908
Ontology ID: RS:0001569
Previously known as: SS.SR-(D9Mco14-D9Rat9)/Mco; S.R(9)x3x2C; SS.SR-(D9Mco14-D9Rat9)/Mco; SS.SR-(D9Mco95-Resp18)/Mco
Type: congenic
Source: Department of Physiology and Cardiovascular Genomics, Medical College of Ohio, Toledo, Ohio
Origin: A congenic strain derived from the progenitor strains SS and SR.
Last Known Status: Unknown
Position
Rat AssemblyChrPosition (strand)SourceJBrowse
mRatBN7.2975,403,227 - 76,771,824RGD_MAPPER_PIPELINEmRatBN7.2
Rnor_6.0981,100,315 - 82,477,136RGD_MAPPER_PIPELINERnor6.0
Rnor_5.0980,867,159 - 82,246,695RGD_MAPPER_PIPELINERnor5.0
RGSC_v3.4974,551,809 - 74,558,151RGD_MAPPER_PIPELINERGSC3.4






References

References - curated
# Reference Title Reference Citation
1. Locating a Blood Pressure Quantitative Trait Locus Within 117 kb on the Rat Genome. Substitution Mapping and Renal Expression Analysis. Garrett MR, etal., Hypertension 2005 Jan 17;.
2. RGD Strain RSO annotation pipeline RGD Automated Pipelines

Region

Position Markers

Flank 1 / 1 (D9Mco95)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2975,403,227 - 75,403,447 (+)MAPPER
Rnor_6.0981,100,315 - 81,100,534NCBI
Rnor_5.0980,867,159 - 80,867,378UniSTS
Celera972,982,614 - 72,982,833UniSTS
Cytogenetic Map9 RGD

Flank 2 / 1 (Resp18)
Rat AssemblyChrPosition (strand)Source
mRatBN7.2976,765,179 - 76,771,824 (-)NCBI
mRatBN7.2 Ensembl976,764,590 - 76,778,722 (-)Ensembl
UTH_Rnor_SHR_Utx985,209,715 - 85,216,056 (-)NCBI
UTH_Rnor_SHRSP_BbbUtx_1.0990,338,603 - 90,344,944 (-)NCBI
UTH_Rnor_WKY_Bbb_1.0988,724,817 - 88,731,158 (-)NCBI
Rnor_6.0982,470,794 - 82,477,136 (-)NCBI
Rnor_6.0 Ensembl982,470,759 - 82,477,181 (-)Ensembl
Rnor_5.0982,240,055 - 82,246,695 (-)NCBI
RGSC_v3.4974,551,809 - 74,558,151 (-)NCBI
RGSC_v3.1974,698,790 - 74,705,133 (-)NCBI
Celera974,335,568 - 74,341,910 (-)NCBI
Cytogenetic Map9q33NCBI
Strain QTL Data
Symbol Name Trait
Bp284 Blood pressure QTL 284 arterial blood pressure trait   (VT:2000000)    

Additional Information

RGD Curation Notes
Note Type Note Reference
strain_phys_biochem Strain showed significantly lower systolic blood pressure than parental SS strain. 1334447

Nomenclature History
Date Current Symbol Current Name Previous Symbol Previous Name Description Reference Status
2011-03-29 SS.SR-(D9Mco95-Resp18)/Mco    SS.SR-(D9Mco14-D9Rat9)/Mco    Symbol updated 68687 APPROVED
2011-03-29 SS.SR-(D9Mco95-Resp18)/Mco    SS.SR-(D9Mco14-D9Rat9)/Mco    Name updated 68913 APPROVED
2011-03-29 SS.SR-(D9Mco95-Resp18)/Mco    SS.SR-(D9Mco14-D9Rat9)/Mco    Symbol updated 68687 APPROVED
2011-03-29 SS.SR-(D9Mco95-Resp18)/Mco    SS.SR-(D9Mco14-D9Rat9)/Mco    Name updated 68913 APPROVED